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L3_068_000G1_scaffold_110

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_110_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..714)
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I8Y5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09587.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transposase
L3_068_000G1_scaffold_110_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

995..2086
DNA (1092bp) protein (364aa)
Uncharacterized protein n=4 Tax=Clostridium clostridioforme RepID=N9XLA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63196.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
XRE family transcriptional regulator
L3_068_000G1_scaffold_110_3
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2157..2870)
DNA (714bp) protein (238aa)
GntR family transcriptional regulator n=8 Tax=Clostridium RepID=N9W1M9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25474.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
putative GntR family transcriptional regulator
L3_068_000G1_scaffold_110_4
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2964..4250)
DNA (1287bp) protein (429aa)
TRAP transporter, DctM subunit n=8 Tax=Clostridium RepID=N9W185_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25475.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
putative transporter
L3_068_000G1_scaffold_110_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4247..4744)
DNA (498bp) protein (166aa)
TRAP C4-dicarboxylate transport system permease component n=6 Tax=Clostridium clostridioforme RepID=N9WSP2_9CLOT
TRAP C4-dicarboxylate transport system permease component {ECO:0000313|EMBL:ENZ63193.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
putative transporter
L3_068_000G1_scaffold_110_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4760..5854)
DNA (1095bp) protein (365aa)
DctP family TRAP transporter solute receptor n=9 Tax=Clostridium RepID=N9WS28_9CLOT
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:ENZ09582.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
putative transporter
L3_068_000G1_scaffold_110_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5869..6642)
DNA (774bp) protein (258aa)
aldolase (EC:4.1.2.-)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=9 Tax=Clostridium RepID=N9X2N7_9CLOT
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:ENZ09581.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_068_000G1_scaffold_110_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6862..7155)
DNA (294bp) protein (98aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9W1N2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09580.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_068_000G1_scaffold_110_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7166..9586)
DNA (2421bp) protein (807aa)
Anaerobic ribonucleoside-triphosphate reductase n=7 Tax=Clostridium clostridioforme RepID=N9W188_9CLOT
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:ENZ63189.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
anaerobic ribonucleoside-triphosphate reductase
L3_068_000G1_scaffold_110_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9888..11168)
DNA (1281bp) protein (427aa)
GTPase HflX n=9 Tax=Clostridium RepID=G5I0M0_9CLOT
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
GTP-binding proten HflX
L3_068_000G1_scaffold_110_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11171..12244)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9WS32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09577.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Tetratricopeptide repeat.
L3_068_000G1_scaffold_110_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12254..12769)
DNA (516bp) protein (172aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
DUTP diphosphatase n=8 Tax=Clostridium RepID=N9XLB4_9CLOT
DUTP diphosphatase {ECO:0000313|EMBL:ENZ63186.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_000G1_scaffold_110_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12937..13200
DNA (264bp) protein (88aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9W1N7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09575.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Helix-turn-helix.
L3_068_000G1_scaffold_110_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13335..13664
DNA (330bp) protein (110aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9YCJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09574.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
HipB; putative transcriptional regulator
L3_068_000G1_scaffold_110_15
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13901..14527)
DNA (627bp) protein (209aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9WSQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25486.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_068_000G1_scaffold_110_16
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14616..15404)
DNA (789bp) protein (263aa)
Segregation and condensation protein B n=9 Tax=Clostridium RepID=N9WS36_9CLOT
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
segregation and condensation protein B
L3_068_000G1_scaffold_110_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15418..16218)
DNA (801bp) protein (267aa)
Segregation and condensation protein A n=9 Tax=Clostridium RepID=N9X2M5_9CLOT
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_000G1_scaffold_110_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16262..17134)
DNA (873bp) protein (291aa)
Metallophosphoesterase n=6 Tax=Clostridium clostridioforme RepID=N9W1P2_9CLOT
Metallophosphoesterase {ECO:0000313|EMBL:ENZ63180.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Predicted phosphohydrolases
L3_068_000G1_scaffold_110_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17179..17865)
DNA (687bp) protein (229aa)
HAD hydrolase, family IA n=6 Tax=Clostridium clostridioforme RepID=N9W196_9CLOT
HAD hydrolase, family IA {ECO:0000313|EMBL:ENZ63179.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000G1_scaffold_110_20
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18028..18726)
DNA (699bp) protein (233aa)
Rubrerythrin n=10 Tax=Clostridium RepID=N9WSQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25491.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Rubrerythrin
L3_068_000G1_scaffold_110_21
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18840..19250
DNA (411bp) protein (137aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WS42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25492.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
XRE family transcriptional regulator
L3_068_000G1_scaffold_110_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19426..20556
DNA (1131bp) protein (377aa)
Fe3+ ABC transporter substrate-binding protein n=9 Tax=Clostridium RepID=N9X2M0_9CLOT
Fe3+ ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ63176.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
extracellular solute-binding protein
L3_068_000G1_scaffold_110_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20737..21837
DNA (1101bp) protein (367aa)
Fe3+ ABC transporter ATP-binding protein n=9 Tax=Clostridium RepID=N9W1P5_9CLOT
Fe3+ ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ09565.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC transporter
L3_068_000G1_scaffold_110_24
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21834..23498
DNA (1665bp) protein (555aa)
Fe3+ ABC transporter permease n=7 Tax=Clostridium RepID=N9W1A0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64496.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
binding-protein-dependent transport system inner membrane protein
L3_068_000G1_scaffold_110_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23574..25301
DNA (1728bp) protein (576aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Two-component system sensor histidine kinase YesM n=6 Tax=Clostridium clostridioforme RepID=N9WSQ9_9CLOT
L3_068_000G1_scaffold_110_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25294..26091
DNA (798bp) protein (266aa)
Two-component system response regulator YesN n=7 Tax=Clostridium clostridioforme RepID=N9WS47_9CLOT
Two-component system response regulator YesN {ECO:0000313|EMBL:ENZ63172.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
AraC family transcriptional regulator
L3_068_000G1_scaffold_110_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26060..26335)
DNA (276bp) protein (92aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9X2L5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63171.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_000G1_scaffold_110_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26372..27193)
DNA (822bp) protein (274aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9W1P7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63170.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
MerR family transcriptional regulator
L3_068_000G1_scaffold_110_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27310..28638
DNA (1329bp) protein (443aa)
MATE efflux family protein n=6 Tax=Clostridium clostridioforme RepID=N9W1A4_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ENZ63169.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
MATE efflux family protein
L3_068_000G1_scaffold_110_30
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28798..29577)
DNA (780bp) protein (260aa)
Two-component system response regulator YesN n=9 Tax=Clostridium RepID=N9WSR4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25500.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
AraC family transcriptional regulator
Displaying items 1-30 of 75 in total

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