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L3_068_000G1_scaffold_158

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_158_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..156
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=D4JMR8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK92272.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_068_000G1_scaffold_158_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

153..518
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JNZ0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94809.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_068_000G1_scaffold_158_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

584..2116
DNA (1533bp) protein (511aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JNZ1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94810.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_068_000G1_scaffold_158_4
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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2144..2293
DNA (150bp) protein (50aa)
Cyclic lactone autoinducer peptide n=2 Tax=Clostridiales RepID=R9IWQ4_9FIRM
Cyclic lactone autoinducer peptide {ECO:0000313|EMBL:EOS23347.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_068_000G1_scaffold_158_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2482..3255
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYV7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91770.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_068_000G1_scaffold_158_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3320..3844
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYV8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91771.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_068_000G1_scaffold_158_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3898..4644
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYV9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91772.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_068_000G1_scaffold_158_8

Not on your lists

4711..5193
DNA (483bp) protein (161aa)
Uncharacterized protein n=3 Tax=root RepID=C7GGQ8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKC48109.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_068_000G1_scaffold_158_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5320..6384
DNA (1065bp) protein (355aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7GGQ9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12186.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_000G1_scaffold_158_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6547..6921
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=2 Tax=root RepID=D4KXU4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12184.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_000G1_scaffold_158_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6975..7625
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C4ZEA3_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK92175.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_068_000G1_scaffold_158_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7708..7893
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=2 Tax=root RepID=D4KXU4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12184.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_000G1_scaffold_158_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7971..8432
DNA (462bp) protein (154aa)
Helix-turn-helix n=4 Tax=Clostridiales RepID=D4KL56_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL07608.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000G1_scaffold_158_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8491..9195
DNA (705bp) protein (235aa)
Response regulator of the LytR/AlgR family n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4D7_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBK90277.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_068_000G1_scaffold_158_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9197..10492
DNA (1296bp) protein (432aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXT8_9FIRM
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase {ECO:0000313|EMBL:CBL12178.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_000G1_scaffold_158_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10598..10759
DNA (162bp) protein (54aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C7GGR6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07611.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000G1_scaffold_158_17

Not on your lists

10763..11344
DNA (582bp) protein (194aa)
Accessory gene regulator B n=1 Tax=human gut metagenome RepID=K1TKI2_9ZZZZ
Accessory gene regulator B {ECO:0000313|EMBL:EKC59756.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Accessory gene regulator B.
L3_068_000G1_scaffold_158_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11719..12144
DNA (426bp) protein (142aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Roseburia intestinalis RepID=D4KL61_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL07613.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000G1_scaffold_158_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12850..13245
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2I3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13823.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_000G1_scaffold_158_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13327..13485
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2I4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07617.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000G1_scaffold_158_21
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13576..15192
DNA (1617bp) protein (539aa)
Resolvase, N-terminal domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSV1_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEG94361.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_068_000G1_scaffold_158_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15164..16063
DNA (900bp) protein (300aa)
Recombinase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4C8_9FIRM
Recombinase.
Recombinase {ECO:0000313|EMBL:CBK90268.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_068_000G1_scaffold_158_23
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16076..17710
DNA (1635bp) protein (545aa)
Resolvase, N-terminal domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSU9_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEG94359.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_068_000G1_scaffold_158_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17919..18500
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KL69_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07621.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000G1_scaffold_158_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18672..19628
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GG06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99237.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_068_000G1_scaffold_158_26
Bacillus cellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19774..20523
DNA (750bp) protein (250aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TU54_BACCJ
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein {ECO:0000313|EMBL:ADU28514.1}; TaxID=649639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141; / JCM 9156 / N-4).;"
L3_068_000G1_scaffold_158_27
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20716..21360
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T3W7_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97254.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_068_000G1_scaffold_158_28
unknown

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comp(21558..21812)
DNA (255bp) protein (85aa)

This feature has no annotations

L3_068_000G1_scaffold_158_29
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

21966..22505
DNA (540bp) protein (180aa)
Uncharacterized protein n=3 Tax=Treponema denticola RepID=M2BM02_TREDN
Uncharacterized protein {ECO:0000313|EMBL:EPF38879.1}; TaxID=999435 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola SP23.;"
hypothetical protein
L3_068_000G1_scaffold_158_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22575..23261
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L053_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12993.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Displaying items 1-30 of 82 in total

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