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L3_068_000G1_scaffold_168

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_168_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(107..949)
DNA (843bp) protein (281aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=9 Tax=Clostridium RepID=G5I538_9CLOT
L3_068_000G1_scaffold_168_2
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1198..2415
DNA (1218bp) protein (406aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=9 Tax=Clostridium RepID=N9V9C4_9CLOT
L3_068_000G1_scaffold_168_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2428..3324)
DNA (897bp) protein (299aa)
Short-chain dehydrogenase/reductase SDR n=5 Tax=Clostridium clostridioforme RepID=N9Y0V1_9CLOT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ENZ59780.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
short-chain dehydrogenase/reductase SDR
L3_068_000G1_scaffold_168_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3414..4463)
DNA (1050bp) protein (350aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=7 Tax=Clostridium RepID=N9WEK3_9CLOT
L3_068_000G1_scaffold_168_5
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4641..5531
DNA (891bp) protein (297aa)
AraC family transcriptional regulator n=10 Tax=Clostridium RepID=N9WF32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61183.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
AraC family transcriptional regulator
L3_068_000G1_scaffold_168_6
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5546..6478
DNA (933bp) protein (311aa)
Radical SAM protein n=10 Tax=Clostridium RepID=N9V8R3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61182.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
radical SAM protein
L3_068_000G1_scaffold_168_7
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7587..8678)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9V9B7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61181.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L3_068_000G1_scaffold_168_8
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8707..10119)
DNA (1413bp) protein (471aa)
Alginate O-acetyltransferase n=7 Tax=Clostridium RepID=N9WTT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61180.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
algI; alginate O-acetylation protein algI
L3_068_000G1_scaffold_168_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10178..11536)
DNA (1359bp) protein (453aa)
MATE efflux family protein n=6 Tax=Clostridium clostridioforme RepID=N9WEJ7_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ENZ59774.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
putative efflux protein, MATE family
L3_068_000G1_scaffold_168_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11879..12445
DNA (567bp) protein (189aa)
Putative manganese efflux pump MntP n=8 Tax=Clostridium RepID=N9WF29_9CLOT
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_000G1_scaffold_168_11
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12597..13343)
DNA (747bp) protein (249aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9V8Q7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61177.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
transglutaminase-like superfamily/putative cell wall binding repeat protein
L3_068_000G1_scaffold_168_12
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13419..14642)
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=7 Tax=Clostridium RepID=N9V9B2_9CLOT
L3_068_000G1_scaffold_168_13
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15186..16091)
DNA (906bp) protein (302aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9WTS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61175.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L3_068_000G1_scaffold_168_14
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16302..17333
DNA (1032bp) protein (344aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=7 Tax=Clostridium RepID=N9WEJ3_9CLOT
L3_068_000G1_scaffold_168_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17483..18325)
DNA (843bp) protein (281aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Undecaprenyl-diphosphatase n=6 Tax=Clostridium clostridioforme RepID=N9WF24_9CLOT
undecaprenol kinase
L3_068_000G1_scaffold_168_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18454..19128)
DNA (675bp) protein (225aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=9 Tax=Clostridium RepID=G5I523_9CLOT
L3_068_000G1_scaffold_168_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19527..20288)
DNA (762bp) protein (254aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
imidazoleglycerol phosphate synthase, cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=7 Tax=Clostridium RepID=N9V9A7_9CLOT
L3_068_000G1_scaffold_168_18
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20362..20967)
DNA (606bp) protein (202aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Imidazole glycerol phosphate synthase subunit HisH n=7 Tax=Clostridium RepID=N9WTS2_9CLOT
hisH; imidazole glycerol phosphate synthase subunit HisH
L3_068_000G1_scaffold_168_19
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21139..21810)
DNA (672bp) protein (224aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9WEI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61169.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L3_068_000G1_scaffold_168_20
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22123..23886
DNA (1764bp) protein (588aa)
Isopentenyl-diphosphate delta-isomerase n=7 Tax=Clostridium RepID=N9WF20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61168.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Predicted ATPase of the ABC class
L3_068_000G1_scaffold_168_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24005..25027)
DNA (1023bp) protein (341aa)
Aldo/keto reductase n=7 Tax=Clostridium RepID=N9V8P5_9CLOT
Aldo/keto reductase {ECO:0000313|EMBL:ENZ59762.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
aldo/keto reductase
L3_068_000G1_scaffold_168_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25201..25443)
DNA (243bp) protein (81aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9V9A0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18380.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_000G1_scaffold_168_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25816..26247
DNA (432bp) protein (144aa)
YbgC/YbaW family acyl-CoA thioester hydrolase n=7 Tax=Clostridium RepID=N9WTR5_9CLOT
YbgC/YbaW family acyl-CoA thioester hydrolase {ECO:0000313|EMBL:ENZ59760.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000G1_scaffold_168_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26335..27423
DNA (1089bp) protein (363aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9WEI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59759.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000G1_scaffold_168_25
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27493..27705
DNA (213bp) protein (71aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9WF16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61163.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L3_068_000G1_scaffold_168_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27825..28439)
DNA (615bp) protein (205aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9V8N9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59757.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000G1_scaffold_168_27
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28648..29655
DNA (1008bp) protein (336aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
aspartate/ammonia ligase (EC:6.3.1.1)
Aspartate--ammonia ligase n=7 Tax=Clostridium RepID=N9V995_9CLOT
L3_068_000G1_scaffold_168_28
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29676..30335
DNA (660bp) protein (220aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9WTQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61160.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L3_068_000G1_scaffold_168_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30421..31701)
DNA (1281bp) protein (427aa)
Multiple sugar ABC transporter substrate-binding protein n=7 Tax=Clostridium RepID=N9WEH7_9CLOT
Multiple sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ59754.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
extracellular solute-binding protein
L3_068_000G1_scaffold_168_30
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31811..32479)
DNA (669bp) protein (223aa)
Two-component system response regulator n=10 Tax=Clostridium RepID=N9WF11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61158.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
LuxR family two component transcriptional regulator
Displaying items 1-30 of 62 in total

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