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L3_068_000G1_scaffold_249

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_249_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(268..1140)
DNA (873bp) protein (291aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9XFG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ19154.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_000G1_scaffold_249_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1737..2846
DNA (1110bp) protein (370aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
gcvT; Aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=7 Tax=Clostridium clostridioforme RepID=G5I152_9CLOT
L3_068_000G1_scaffold_249_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2915..3295
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=8 Tax=Clostridium clostridioforme RepID=G5I153_9CLOT
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
glycine cleavage system H protein
L3_068_000G1_scaffold_249_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3391..4716
DNA (1326bp) protein (442aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=8 Tax=Clostridium clostridioforme RepID=G5I154_9CLOT
hypothetical protein
L3_068_000G1_scaffold_249_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4713..6146
DNA (1434bp) protein (478aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=7 Tax=Clostridium clostridioforme RepID=G5I155_9CLOT
glycine dehydrogenase subunit 2
L3_068_000G1_scaffold_249_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6272..7300
DNA (1029bp) protein (343aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Lipoyltransferase and lipoate-protein ligase n=7 Tax=Clostridium clostridioforme RepID=N9XFH2_9CLOT
lplA; hypothetical protein
L3_068_000G1_scaffold_249_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7336..8766
DNA (1431bp) protein (477aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
bfmBC; protein BfmBC (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=8 Tax=Clostridium clostridioforme RepID=G5I157_9CLOT
L3_068_000G1_scaffold_249_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8891..9484
DNA (594bp) protein (198aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9VV92_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ19161.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_000G1_scaffold_249_9
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9781..11082)
DNA (1302bp) protein (434aa)
TRAP transporter, DctM subunit n=8 Tax=Clostridium RepID=N9XG80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62624.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
TRAP dicarboxylate transporter subunit DctM
L3_068_000G1_scaffold_249_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11082..11582)
DNA (501bp) protein (167aa)
TRAP C4-dicarboxylate transport system DctQ subunit n=8 Tax=Clostridium clostridioforme RepID=N9X4I9_9CLOT
TRAP C4-dicarboxylate transport system DctQ subunit {ECO:0000313|EMBL:ENZ19163.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
TRAP dicarboxylate transporter subunit DctQ
L3_068_000G1_scaffold_249_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11597..12622)
DNA (1026bp) protein (342aa)
DctP family TRAP transporter solute receptor n=7 Tax=Clostridium clostridioforme RepID=N9XFH5_9CLOT
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:ENZ63935.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
TRAP dicarboxylate transporter subunit DctP
L3_068_000G1_scaffold_249_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12691..15192)
DNA (2502bp) protein (834aa)
Alpha-glucosidase n=7 Tax=Clostridium clostridioforme RepID=N9VVU6_9CLOT
Alpha-glucosidase {ECO:0000313|EMBL:ENZ19165.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
alpha-glucosidase
L3_068_000G1_scaffold_249_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15404..16243
DNA (840bp) protein (280aa)
AraC family transcriptional regulator n=8 Tax=Clostridium clostridioforme RepID=N9VV97_9CLOT
AraC family transcriptional regulator {ECO:0000313|EMBL:ENZ63937.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
AraC family transcriptional regulator
L3_068_000G1_scaffold_249_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16245..16448
DNA (204bp) protein (68aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9WM32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63938.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_000G1_scaffold_249_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16474..16725
DNA (252bp) protein (84aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9WLH3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63939.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_000G1_scaffold_249_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16891..17298
DNA (408bp) protein (136aa)
Two-component system sensor histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9XFI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ19169.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_068_000G1_scaffold_249_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17295..17480)
DNA (186bp) protein (62aa)
Phage shock protein n=9 Tax=Clostridium RepID=N9VVV3_9CLOT
Phage shock protein {ECO:0000313|EMBL:ENZ19170.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
phage shock protein C, PspC
L3_068_000G1_scaffold_249_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17507..18364)
DNA (858bp) protein (286aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9VVA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63942.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000G1_scaffold_249_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18370..19179)
DNA (810bp) protein (270aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9WM37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63943.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000G1_scaffold_249_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19176..19496)
DNA (321bp) protein (107aa)
Uncharacterized protein n=17 Tax=Clostridium RepID=A8RL52_9CLOT
PadR family transcriptional regulator {ECO:0000313|EMBL:ENZ19173.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
PadR family transcriptional regulator
L3_068_000G1_scaffold_249_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19998..21386)
DNA (1389bp) protein (463aa)
Transporter n=7 Tax=Clostridium clostridioforme RepID=G5I172_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Na+-dependent transporters of the SNF family
L3_068_000G1_scaffold_249_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21700..22845
DNA (1146bp) protein (382aa)
Fe3+ ABC transporter substrate-binding protein n=8 Tax=Clostridium clostridioforme RepID=N9VVV9_9CLOT
Fe3+ ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ19175.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC-type Fe3+ transport system, periplasmic component
L3_068_000G1_scaffold_249_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22838..24571
DNA (1734bp) protein (578aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9VVA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ19176.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC-type Fe3+ transport system, permease component
L3_068_000G1_scaffold_249_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24561..25319
DNA (759bp) protein (253aa)
Fe3+ ABC transporter ATP-binding protein n=7 Tax=Clostridium clostridioforme RepID=N9XG99_9CLOT
Fe3+ ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ19177.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC-type spermidine/putrescine transport systems, ATPase components
L3_068_000G1_scaffold_249_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25331..25957
DNA (627bp) protein (209aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9WLI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ19178.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Predicted metal-dependent phosphoesterases (PHP family)
L3_068_000G1_scaffold_249_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26114..27466
DNA (1353bp) protein (451aa)
Transporter n=8 Tax=Clostridium clostridioforme RepID=G5I177_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
sodium:neurotransmitter symporter
L3_068_000G1_scaffold_249_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27544..28275
DNA (732bp) protein (244aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9XVE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ19180.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transcriptional regulator, GntR family
L3_068_000G1_scaffold_249_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28430..29491
DNA (1062bp) protein (354aa)
DctP family TRAP transporter solute receptor n=5 Tax=Clostridium clostridioforme RepID=N9Y6W2_9CLOT
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:ENZ63952.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
L3_068_000G1_scaffold_249_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29512..30015
DNA (504bp) protein (168aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9WM46_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63953.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000G1_scaffold_249_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30012..31286
DNA (1275bp) protein (425aa)
TRAP transporter, DctM subunit n=7 Tax=Clostridium clostridioforme RepID=N9WLI8_9CLOT
TRAP transporter, DctM subunit {ECO:0000313|EMBL:ENZ63954.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
TRAP transporter, DctM subunit
Displaying items 1-30 of 50 in total

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