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L3_068_000G1_scaffold_253

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_253_1
unknown

Not on your lists

comp(3..68)
DNA (66bp) protein (22aa)

This feature has no annotations

L3_068_000G1_scaffold_253_2
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

171..713
DNA (543bp) protein (181aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
MJ0936 family phosphodiesterase n=2 Tax=Ruminococcus RepID=C6JE33_9FIRM
phosphoesterase, MJ0936 family
L3_068_000G1_scaffold_253_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

747..1898
DNA (1152bp) protein (384aa)
Uncharacterized protein n=3 Tax=Ruminococcus RepID=C6JE32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76931.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted N6-adenine-specific DNA methylase
L3_068_000G1_scaffold_253_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1949..2533
DNA (585bp) protein (195aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=2 Tax=Ruminococcus RepID=C6JE31_9FIRM
L3_068_000G1_scaffold_253_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2530..3009
DNA (480bp) protein (160aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKF7_9FIRM
phosphoesterase, MJ0936 family
L3_068_000G1_scaffold_253_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4247..5011
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76928.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_253_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5050..5754
DNA (705bp) protein (235aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP47_9FIRM
deoD; purine nucleoside phosphorylase
L3_068_000G1_scaffold_253_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5841..6221
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76926.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Mn-dependent transcriptional regulator
L3_068_000G1_scaffold_253_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6538..7479)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76925.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L3_068_000G1_scaffold_253_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7779..9155)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79478.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Permeases
L3_068_000G1_scaffold_253_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9318..10595)
DNA (1278bp) protein (426aa)
Cytosine deaminase and related metal-dependent hydrolases (EC:3.5.4.3)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79479.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_068_000G1_scaffold_253_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11278..12426
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79480.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted permease
L3_068_000G1_scaffold_253_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12590..12964
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79481.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_000G1_scaffold_253_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13115..14341)
DNA (1227bp) protein (409aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=2 Tax=Ruminococcus RepID=C6JE21_9FIRM
L3_068_000G1_scaffold_253_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14802..15842
DNA (1041bp) protein (347aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
N-acetyl-gamma-glutamyl-phosphate reductase, common form (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPT7_9FIRM
L3_068_000G1_scaffold_253_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16147..17370
DNA (1224bp) protein (408aa)
glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR83_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_000G1_scaffold_253_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17486..18382
DNA (897bp) protein (299aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=2 Tax=Ruminococcus RepID=C6JE18_9FIRM
L3_068_000G1_scaffold_253_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18369..19559
DNA (1191bp) protein (397aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
acetylornithine aminotransferase apoenzyme (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE17_9FIRM
L3_068_000G1_scaffold_253_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19625..20944)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79871.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_068_000G1_scaffold_253_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20946..21662)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79873.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Response regulator of the LytR/AlgR family
L3_068_000G1_scaffold_253_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22048..22422
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76913.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_253_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22449..24515
DNA (2067bp) protein (689aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79876.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_000G1_scaffold_253_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24674..25387)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002EEA148
Uncharacterized protein {ECO:0000313|EMBL:EES76452.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulator of the LytR/AlgR family
L3_068_000G1_scaffold_253_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25403..26731)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76451.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_253_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27011..27958
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76450.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_000G1_scaffold_253_26
unknown

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27906..28061
DNA (156bp) protein (52aa)

This feature has no annotations

L3_068_000G1_scaffold_253_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28196..29647
DNA (1452bp) protein (484aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E1D1_9FIRM
diguanylate cyclase (GGDEF) domain
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBK91652.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_068_000G1_scaffold_253_28
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29709..29903
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WV94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70339.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L3_068_000G1_scaffold_253_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30159..31046
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002F2239C
Uncharacterized protein {ECO:0000313|EMBL:EGN48014.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_068_000G1_scaffold_253_30
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31036..31731
DNA (696bp) protein (232aa)
VTC domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BAY4_9CLOT
VTC domain protein {ECO:0000313|EMBL:ERI69360.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
Displaying items 1-30 of 48 in total

View Taxonomy