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L3_068_000G1_scaffold_255

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_255_1
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..962
DNA (960bp) protein (320aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
spore protease (EC:3.4.24.78)
Germination protease n=2 Tax=Clostridium RepID=G5I7A9_9CLOT
L3_068_000G1_scaffold_255_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1036..2370
DNA (1335bp) protein (445aa)
Stage II sporulation protein P n=9 Tax=Clostridium RepID=N9UYK8_9CLOT
Stage II sporulation protein P {ECO:0000313|EMBL:ENZ57898.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Stage II sporulation P family protein
L3_068_000G1_scaffold_255_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2444..4258
DNA (1815bp) protein (605aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Elongation factor 4 n=9 Tax=Clostridium RepID=G5I7B1_9CLOT
GTP-binding protein LepA
L3_068_000G1_scaffold_255_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4304..5557
DNA (1254bp) protein (418aa)
Oxygen-independent coproporphyrinogen III oxidase n=6 Tax=Clostridium clostridioforme RepID=N9WIM6_9CLOT
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:ENZ08806.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
oxygen-independent coproporphyrinogen III oxidase
L3_068_000G1_scaffold_255_5
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5642..6379
DNA (738bp) protein (246aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9X0Y8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23789.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_068_000G1_scaffold_255_6
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6549..7115
DNA (567bp) protein (189aa)
Peroxiredoxin n=8 Tax=Clostridium RepID=G5I7B4_9CLOT
Peroxiredoxin {ECO:0000313|EMBL:CDF23788.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
alkyl hydrogen peroxide reductase
L3_068_000G1_scaffold_255_7
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7168..7785
DNA (618bp) protein (206aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9UYL4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23787.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
alkyl hydroperoxide reductase F subunit
L3_068_000G1_scaffold_255_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8042..8611
DNA (570bp) protein (190aa)
Glycerol-3-phosphate responsive antiterminator GlpP n=9 Tax=Clostridium RepID=N9UY23_9CLOT
Glycerol-3-phosphate responsive antiterminator GlpP {ECO:0000313|EMBL:ENZ08802.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Glycerol-3-phosphate responsive antiterminator (mRNA-binding)
L3_068_000G1_scaffold_255_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8712..10208
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=10 Tax=Clostridium RepID=G5I7B7_9CLOT
L3_068_000G1_scaffold_255_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10314..11027
DNA (714bp) protein (238aa)
MIP family channel protein n=10 Tax=Clostridium RepID=N9W716_9CLOT
MIP family channel protein {ECO:0000313|EMBL:ENZ08800.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
MIP family channel proteins
L3_068_000G1_scaffold_255_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11269..12708
DNA (1440bp) protein (480aa)
Glycerol-3-phosphate dehydrogenase n=9 Tax=Clostridium RepID=N9WI48_9CLOT
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:ENZ57889.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Predicted dehydrogenase
L3_068_000G1_scaffold_255_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12726..13991
DNA (1266bp) protein (422aa)
Thioredoxin reductase (EC:1.5.3.1)
Sarcosine oxidase subunit alpha n=10 Tax=Clostridium RepID=N9UYL8_9CLOT
Sarcosine oxidase subunit alpha {ECO:0000313|EMBL:ENZ08798.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_068_000G1_scaffold_255_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13995..14354
DNA (360bp) protein (120aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9UY26_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ08797.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Uncharacterized protein with conserved CXXC pairs
L3_068_000G1_scaffold_255_14
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14522..14713
DNA (192bp) protein (64aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RYY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63780.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L3_068_000G1_scaffold_255_15
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14877..15863
DNA (987bp) protein (329aa)
dihydroxyacetone kinase DhaK subunit (EC:2.7.1.- 2.7.1.121)
Dihydroxyacetone kinase n=8 Tax=Clostridium RepID=G5I7C3_9CLOT
Dihydroxyacetone kinase {ECO:0000313|EMBL:CDF23779.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L3_068_000G1_scaffold_255_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15914..16537
DNA (624bp) protein (208aa)
dihydroxyacetone kinase DhaL subunit (EC:2.7.1.- 2.7.1.121)
Dihydroxyacetone kinase n=9 Tax=Clostridium RepID=G5I7C4_9CLOT
Dihydroxyacetone kinase, L subunit {ECO:0000313|EMBL:ENZ08794.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_068_000G1_scaffold_255_17
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16605..16985
DNA (381bp) protein (127aa)
dihydroxyacetone kinase DhaM subunit (EC:2.7.1.121)
Dihydroxyacetone kinase n=8 Tax=Clostridium RepID=G5I7C5_9CLOT
Dihydroxyacetone kinase {ECO:0000313|EMBL:CDF23777.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L3_068_000G1_scaffold_255_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17056..17406)
DNA (351bp) protein (117aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9UY31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ08792.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_000G1_scaffold_255_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17403..17909)
DNA (507bp) protein (169aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WIN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ08791.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_000G1_scaffold_255_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18221..18811
DNA (591bp) protein (197aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9W727_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ08790.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
heptaprenyl diphosphate synthase component I
L3_068_000G1_scaffold_255_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18885..20468
DNA (1584bp) protein (528aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=9 Tax=Clostridium RepID=G5I7C9_9CLOT
L3_068_000G1_scaffold_255_22
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20850..21182
DNA (333bp) protein (111aa)
Cupin n=5 Tax=Clostridium RepID=N9YTY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX99642.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Cupin domain.
L3_068_000G1_scaffold_255_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21430..21777
DNA (348bp) protein (116aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9UY36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ57877.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
protein of unknown function DUF161
L3_068_000G1_scaffold_255_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21774..21965
DNA (192bp) protein (64aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WIP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ57876.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_000G1_scaffold_255_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22051..22443
DNA (393bp) protein (131aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9W731_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ57875.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Sugar phosphate permease
L3_068_000G1_scaffold_255_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22876..24123
DNA (1248bp) protein (416aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=2 Tax=Clostridium clostridioforme RepID=G5I7D4_9CLOT
L3_068_000G1_scaffold_255_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24163..25251
DNA (1089bp) protein (363aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
gcvT; Aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=9 Tax=Clostridium RepID=G5I7D5_9CLOT
L3_068_000G1_scaffold_255_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25269..25646
DNA (378bp) protein (126aa)
Glycine cleavage system H protein n=8 Tax=Clostridium clostridioforme RepID=G5I7D6_9CLOT
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
glycine cleavage system H protein
L3_068_000G1_scaffold_255_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25671..26990
DNA (1320bp) protein (440aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Probable glycine dehydrogenase (decarboxylating) subunit 1; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
gcvPA; protein GcvPA (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=4 Tax=Clostridium clostridioforme RepID=N9WIP8_9CLOT
L3_068_000G1_scaffold_255_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26987..28429
DNA (1443bp) protein (481aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
gcvPB; putative glycine dehydrogenase [decarboxylating] subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=9 Tax=Clostridium RepID=G5I7D8_9CLOT
Displaying items 1-30 of 55 in total

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