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L3_068_000G1_scaffold_268

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_268_1
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..495
DNA (495bp) protein (165aa)
Sporulation integral membrane protein YtvI n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G9D7_9FIRM
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:CCY13793.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
sporulation integral membrane protein YtvI
L3_068_000G1_scaffold_268_2
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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587..799
DNA (213bp) protein (71aa)
Cold-shock DNA-binding domain protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZ07_9FIRM
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFF68708.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
cold-shock DNA-binding domain-containing protein
L3_068_000G1_scaffold_268_3
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(902..1138)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6T8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15333.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_068_000G1_scaffold_268_4
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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1350..3710
DNA (2361bp) protein (787aa)
DEAD2 domain protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WB40_9FIRM
DEAD2 domain protein {ECO:0000313|EMBL:CDD06590.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Rad3-related DNA helicases
L3_068_000G1_scaffold_268_5
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4206..7316
DNA (3111bp) protein (1037aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Clostridium sp. CAG:149 RepID=R5LXI3_9CLOT
L3_068_000G1_scaffold_268_6
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7640..10081
DNA (2442bp) protein (814aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium sp. CAG:632 RepID=R5KA14_9CLOT
L3_068_000G1_scaffold_268_7
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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10180..11163
DNA (984bp) protein (328aa)
SpoIID/LytB domain protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MI21_9FIRM
SpoIID/LytB domain protein {ECO:0000313|EMBL:EDR96510.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
SpoIID/LytB domain
L3_068_000G1_scaffold_268_8
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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11126..11914
DNA (789bp) protein (263aa)
Membrane-bound metallopeptidase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C5G8_9FIRM
Membrane-bound metallopeptidase {ECO:0000313|EMBL:CDD72568.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Membrane-bound metallopeptidase
L3_068_000G1_scaffold_268_9
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12356..12613
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6G8T9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB20780.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
putative O-methyltransferase
L3_068_000G1_scaffold_268_10
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12656..13342)
DNA (687bp) protein (229aa)
Channel protein, hemolysin III family n=2 Tax=Coprococcus RepID=C0BDX0_9FIRM
Channel protein, hemolysin III family {ECO:0000313|EMBL:EEG88406.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
channel protein, hemolysin III family
L3_068_000G1_scaffold_268_11
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13632..14375
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZEG8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ14246.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
L3_068_000G1_scaffold_268_12
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14621..16210
DNA (1590bp) protein (530aa)
Superfamily II DNA and RNA helicases n=1 Tax=Coprococcus catus GD/7 RepID=D4J9I9_9FIRM
Superfamily II DNA and RNA helicases
Superfamily II DNA and RNA helicases {ECO:0000313|EMBL:CBK81010.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_068_000G1_scaffold_268_13
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16338..17714
DNA (1377bp) protein (459aa)
Amino acid carrier protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHQ1_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EDS09019.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
amino acid carrier protein
L3_068_000G1_scaffold_268_14
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17878..18942
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8P8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD61289.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Sporulation and spore germination.
L3_068_000G1_scaffold_268_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19134..19982
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3AQM4_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CCZ60055.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L3_068_000G1_scaffold_268_16
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20116..21369
DNA (1254bp) protein (418aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKM2_9FIRM
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CCY13347.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L3_068_000G1_scaffold_268_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21435..22226)
DNA (792bp) protein (264aa)
Cof-like hydrolase n=2 Tax=Clostridium RepID=B6FSA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24509.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
HAD-superfamily hydrolase, subfamily IIB
L3_068_000G1_scaffold_268_18
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22324..22845)
DNA (522bp) protein (174aa)
Peptidyl-prolyl cis-trans isomerase B {ECO:0000313|EMBL:KJJ68406.1}; EC=5.2.1.8 {ECO:0000313|EMBL:KJJ68406.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Peptidylprolyl isomerase (EC:5.2.1.8)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNW3_9CLOT
L3_068_000G1_scaffold_268_19
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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23078..23581
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JSB1_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ85149.1}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_068_000G1_scaffold_268_20
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23578..24075
DNA (498bp) protein (166aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
7-cyano-7-deazaguanine reductase (EC:1.7.1.13)
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5C7X0_9FIRM
L3_068_000G1_scaffold_268_21
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24072..24770
DNA (699bp) protein (233aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
7-cyano-7-deazaguanine synthase n=2 Tax=Blautia RepID=C0CIL2_9FIRM
exsB protein
L3_068_000G1_scaffold_268_22
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24916..25854)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37026.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
GNAT family acetyltransferase
L3_068_000G1_scaffold_268_23
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26020..27066
DNA (1047bp) protein (349aa)
YceG family protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NU48_9CLOT
YceG family protein {ECO:0000313|EMBL:CCZ07700.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
periplasmic solute-binding protein
L3_068_000G1_scaffold_268_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27159..28379)
DNA (1221bp) protein (407aa)
Transporter major facilitator family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N9M7_9FIRM
Transporter major facilitator family {ECO:0000313|EMBL:CCY98514.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
major facilitator superfamily protein
L3_068_000G1_scaffold_268_25
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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28659..29429
DNA (771bp) protein (257aa)
Transcriptional regulator, DeoR family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVH7_9FIRM
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EDM99946.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Transcriptional regulators of sugar metabolism
L3_068_000G1_scaffold_268_26
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29407..30309
DNA (903bp) protein (301aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Clostridium sp. CAG:510 RepID=R6C2E0_9CLOT
L3_068_000G1_scaffold_268_27
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30364..32355
DNA (1992bp) protein (664aa)
PTS system protein n=3 Tax=Firmicutes RepID=E5VKS2_9FIRM
PTS system protein {ECO:0000313|EMBL:EFV16547.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
L3_068_000G1_scaffold_268_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32458..33627)
DNA (1170bp) protein (390aa)
Malate dehydrogenase (oxaloacetate-decarboxylating) (EC:1.1.1.38)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IX45_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41291.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_068_000G1_scaffold_268_29
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33676..35040)
DNA (1365bp) protein (455aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
class II fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW48_9CLOT
L3_068_000G1_scaffold_268_30
Virgibacillus sp. SK37, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

35417..36463
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Virgibacillus halodenitrificans RepID=UPI0002DB3FF7
carbohydrate kinase
Carbohydrate kinase {ECO:0000313|EMBL:AIF44852.1}; TaxID=403957 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. SK37.;"
Displaying items 1-30 of 44 in total

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