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L3_068_000G1_scaffold_273

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Displaying items 1-30 of 71 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_273_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..308)
DNA (306bp) protein (102aa)
Thioredoxin-like protein n=2 Tax=Bifidobacterium longum RepID=V6XZ67_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ65932.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_068_000G1_scaffold_273_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(555..1562)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=6 Tax=Bifidobacterium longum RepID=V6XUL8_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ65931.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_068_000G1_scaffold_273_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1562..2572)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DTU6_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW43283.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_068_000G1_scaffold_273_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2722..3690
DNA (969bp) protein (323aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MX85_BIFL1
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
peptidyl-prolyl cis-trans isomerase
L3_068_000G1_scaffold_273_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3736..4506)
DNA (771bp) protein (257aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Endonuclease NucS n=19 Tax=Bifidobacterium RepID=NUCS_BIFLD
hypothetical protein
L3_068_000G1_scaffold_273_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4594..4887)
DNA (294bp) protein (98aa)
F0F1-type ATP synthase epsilon subunit n=12 Tax=Bifidobacterium RepID=B3DTU9_BIFLD
ATP synthase subunit epsilon
ATP synthase, delta/epsilon subunit, beta-sandwich domain protein {ECO:0000313|EMBL:EEQ54412.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_068_000G1_scaffold_273_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4887..6359)
DNA (1473bp) protein (491aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
ATP synthase subunit beta n=20 Tax=Bifidobacterium RepID=ATPB_BIFLD
ATP synthase subunit betaeta
L3_068_000G1_scaffold_273_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6368..7291)
DNA (924bp) protein (308aa)
ATP synthase gamma chain n=18 Tax=Bifidobacterium RepID=ATPG_BIFLD
ATP synthase subunit gamma
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_068_000G1_scaffold_273_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7295..8926)
DNA (1632bp) protein (544aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
ATP synthase subunit alpha n=20 Tax=Bifidobacterium RepID=ATPA_BIFLD
ATP synthase subunit alpha
L3_068_000G1_scaffold_273_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9002..9838)
DNA (837bp) protein (279aa)
ATP synthase subunit delta n=17 Tax=Bifidobacterium longum RepID=ATPD_BIFLD
ATP synthase subunit delta
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_068_000G1_scaffold_273_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9873..10391)
DNA (519bp) protein (173aa)
ATP synthase subunit b n=18 Tax=Bifidobacterium RepID=ATPF_BIFLO
ATP synthase subunit B
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_068_000G1_scaffold_273_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10448..10675)
DNA (228bp) protein (76aa)
ATP synthase subunit c n=23 Tax=Bifidobacterium RepID=ATPL_BIFLS
ATP synthase subunit C
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_068_000G1_scaffold_273_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10779..11591)
DNA (813bp) protein (271aa)
ATP synthase subunit a n=18 Tax=Bifidobacterium RepID=B3DTV6_BIFLD
ATP synthase subunit A
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_068_000G1_scaffold_273_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12053..13087)
DNA (1035bp) protein (345aa)
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Homoserine O-succinyltransferase n=11 Tax=Bifidobacterium RepID=B3DTV7_BIFLD
L3_068_000G1_scaffold_273_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13475..14299
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJT8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76636.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Site-specific recombinase XerD
L3_068_000G1_scaffold_273_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14349..14621
DNA (273bp) protein (91aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=B3DTV9_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD76635.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_068_000G1_scaffold_273_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14605..14889
DNA (285bp) protein (95aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=B3DTW0_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK34273.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L3_068_000G1_scaffold_273_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14955..15218)
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A7A6X9_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71085.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_068_000G1_scaffold_273_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15306..16538)
DNA (1233bp) protein (411aa)
Lyzozyme M1 (1,4-beta-N-acetylmuramidase) n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6DA83_BIFLN
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
Glycosyl hydrolases 25 family protein {ECO:0000313|EMBL:CCK34271.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L3_068_000G1_scaffold_273_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16602..16919)
DNA (318bp) protein (106aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A7A6Y1_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82564.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L3_068_000G1_scaffold_273_21
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16916..17050)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NEQ3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY95647.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L3_068_000G1_scaffold_273_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17208..18443)
DNA (1236bp) protein (412aa)
Reverse transcriptase (RNA-dependent DNA polymerase) n=3 Tax=Bifidobacterium RepID=D6DA86_BIFLN
Reverse transcriptase (RNA-dependent DNA polymerase).
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:CBK71089.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_068_000G1_scaffold_273_23
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18857..20437)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5N136_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY95649.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L3_068_000G1_scaffold_273_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20454..21176)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A338_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76627.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L3_068_000G1_scaffold_273_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21163..21330)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJS6_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76626.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L3_068_000G1_scaffold_273_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21330..21926)
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R5NEQ9_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71093.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_068_000G1_scaffold_273_27
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21936..25664)
DNA (3729bp) protein (1243aa)
Phage minor structural protein N-terminal region n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MW37_9BIFI
Phage minor structural protein N-terminal region {ECO:0000313|EMBL:CCY95653.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
phage minor structural protein, N-terminal region
L3_068_000G1_scaffold_273_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25675..26457)
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A6Z1_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:CCK34260.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L3_068_000G1_scaffold_273_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26477..29542)
DNA (3066bp) protein (1022aa)
Tape measure domain protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HZ56_BIFLN
Tape measure domain protein {ECO:0000313|EMBL:CCK34259.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Mu-like phage minor tail protein
L3_068_000G1_scaffold_273_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29544..29936)
DNA (393bp) protein (131aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A6Z3_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:CCK34258.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
Displaying items 1-30 of 71 in total

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