ggKbase home page

L3_068_000G1_scaffold_293

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_293_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..259
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22662.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative integrase
L3_068_000G1_scaffold_293_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

493..1233
DNA (741bp) protein (247aa)
Peptidase, M23 family n=2 Tax=Clostridiales RepID=U2A8Z4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO22661.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative metalloendopeptidase
L3_068_000G1_scaffold_293_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1305..2213)
DNA (909bp) protein (303aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C4G6_9CLOT
PAS/PAC sensor signal transduction histidine kinase
L3_068_000G1_scaffold_293_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2377..3390
DNA (1014bp) protein (338aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=2 Tax=Clostridiales RepID=G9YPN4_9FIRM
glyceraldehyde-3-phosphate dehydrogenase
L3_068_000G1_scaffold_293_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3662..4732)
DNA (1071bp) protein (357aa)
Alanine racemase domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AS92_9CLOT
Alanine racemase domain protein {ECO:0000313|EMBL:ERI62248.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
alanine racemase
L3_068_000G1_scaffold_293_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4856..5236
DNA (381bp) protein (127aa)
Transcriptional regulator, GntR family n=3 Tax=Clostridiales RepID=G9YPN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54984.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_068_000G1_scaffold_293_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5233..6093
DNA (861bp) protein (287aa)
ABC transporter, ATP-binding protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPN7_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHM52517.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ABC transporter
L3_068_000G1_scaffold_293_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6090..6734
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C4H0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI62251.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_000G1_scaffold_293_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6737..7360
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BZ44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54981.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_068_000G1_scaffold_293_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7516..8496)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM52520.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_068_000G1_scaffold_293_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8493..9029)
DNA (537bp) protein (179aa)
Sigma-70 region 2 n=2 Tax=Clostridiales RepID=G9YPP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54979.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Fis family transcriptional regulator
L3_068_000G1_scaffold_293_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9184..12846)
DNA (3663bp) protein (1221aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AQ85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54978.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
peptidase M14 carboxypeptidase A
L3_068_000G1_scaffold_293_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13414..14583)
DNA (1170bp) protein (390aa)
4-phosphoerythronate dehydrogenase n=3 Tax=Clostridiales RepID=G9YPP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22651.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative oxidoreductase
L3_068_000G1_scaffold_293_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14742..15827)
DNA (1086bp) protein (362aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
serC; Phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLW1_9FIRM
L3_068_000G1_scaffold_293_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16081..16437
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=U2A910_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55044.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_068_000G1_scaffold_293_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16424..16846
DNA (423bp) protein (141aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Clostridiales RepID=G9YPP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22647.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_000G1_scaffold_293_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16884..18206
DNA (1323bp) protein (441aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22646.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_000G1_scaffold_293_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18276..18611
DNA (336bp) protein (112aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YPP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22645.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_000G1_scaffold_293_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19072..19782
DNA (711bp) protein (237aa)
PHP domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AQ97_9CLOT
PHP domain protein {ECO:0000313|EMBL:ERI62270.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Predicted metal-dependent phosphoesterases (PHP family)
L3_068_000G1_scaffold_293_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20069..20563
DNA (495bp) protein (165aa)
NADH-quinone oxidoreductase, E subunit n=2 Tax=Clostridiales RepID=G9YPQ0_9FIRM
NADH-quinone oxidoreductase, E subunit {ECO:0000313|EMBL:EHO22643.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_000G1_scaffold_293_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21270..21821
DNA (552bp) protein (184aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AAX7_9CLOT
hypothetical protein
L3_068_000G1_scaffold_293_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21826..22194
DNA (369bp) protein (123aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YUN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42024.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_068_000G1_scaffold_293_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22208..24010
DNA (1803bp) protein (601aa)
hndC; NADP-reducing hydrogenase subunit HndC (EC:1.12.1.3)
Protein HymB n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C6G4_9CLOT
Protein HymB {ECO:0000313|EMBL:ERI62966.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_068_000G1_scaffold_293_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24025..25779
DNA (1755bp) protein (585aa)
hndD; NADP-reducing hydrogenase subunit HndC (EC:1.12.1.3)
Hydrogenase, Fe-only n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLV1_9FIRM
Hydrogenase, Fe-only {ECO:0000313|EMBL:EHO22639.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_000G1_scaffold_293_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25881..26954
DNA (1074bp) protein (358aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22638.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Xaa-Pro aminopeptidase
L3_068_000G1_scaffold_293_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26993..27868)
DNA (876bp) protein (292aa)
EDD domain protein, DegV family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AAY1_9CLOT
EDD domain protein, DegV family {ECO:0000313|EMBL:ERI62969.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
DegV family protein
L3_068_000G1_scaffold_293_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27968..28564
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22636.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
TetR family transcriptional regulator
L3_068_000G1_scaffold_293_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28852..29478)
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CLU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22635.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_000G1_scaffold_293_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29485..29862)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YUM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55030.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative Cytosolic Protein
L3_068_000G1_scaffold_293_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30001..31188
DNA (1188bp) protein (396aa)
Sporulation integral membrane protein YlbJ n=3 Tax=Clostridiales RepID=H1CLU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55029.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
nucleoside recognition
Displaying items 1-30 of 49 in total

View Taxonomy