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L3_068_000G1_scaffold_304

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_304_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(489..740)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87113.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L3_068_000G1_scaffold_304_2
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(712..1164)
DNA (453bp) protein (151aa)
Sigma-70, region 4 n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTF7_9FIRM
Sigma-70, region 4 {ECO:0000313|EMBL:EDM87112.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Sigma-70, region 4.
L3_068_000G1_scaffold_304_3
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1411..2001)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87111.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Accessory gene regulator B.
L3_068_000G1_scaffold_304_4
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2003..2152)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87110.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L3_068_000G1_scaffold_304_5
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2307..2702)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87109.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L3_068_000G1_scaffold_304_6
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2803..4119)
DNA (1317bp) protein (439aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTF3_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDM87108.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_068_000G1_scaffold_304_7
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4106..4834)
DNA (729bp) protein (243aa)
LytTr DNA-binding domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTF2_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EDM87107.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Response regulator of the LytR/AlgR family
L3_068_000G1_scaffold_304_8
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4836..5204)
DNA (369bp) protein (123aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTF1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDM87106.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Helix-turn-helix.
L3_068_000G1_scaffold_304_9
Acholeplasma palmae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

6369..8618
DNA (2250bp) protein (750aa)
Uncharacterized protein n=1 Tax=Acholeplasma palmae (strain ATCC 49389 / J233) RepID=U4KN48_ACHPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCV63590.1}; TaxID=38986 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma palmae.;"
L3_068_000G1_scaffold_304_10
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8733..9668
DNA (936bp) protein (312aa)
Putative beta-lactamase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1K2_9FIRM
Beta-lactamase {ECO:0000313|EMBL:ETT36677.1}; TaxID=1226754 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-192.;"
beta-lactamase
L3_068_000G1_scaffold_304_11
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9788..10999
DNA (1212bp) protein (404aa)
Putative uncharacterized protein id=4011105 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
L3_068_000G1_scaffold_304_12
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11332..12018)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J8N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS30331.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
ABC transporter ATP-binding protein
L3_068_000G1_scaffold_304_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12496..13779)
DNA (1284bp) protein (428aa)
Transposase, IS116/IS110/IS902 family n=11 Tax=root RepID=A5KMK3_9FIRM
Transposase, IS116/IS110/IS902 family {ECO:0000313|EMBL:EDK24419.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
transposase
L3_068_000G1_scaffold_304_14
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13898..15709)
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JGS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS30332.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
efflux ABC transporter permease
L3_068_000G1_scaffold_304_15
unknown

Not on your lists

comp(16524..16652)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_068_000G1_scaffold_304_16
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16698..18407)
DNA (1710bp) protein (570aa)
ABC transporter related protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TEX6_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:EGD46914.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
multidrug export ATP-binding protein/permease
L3_068_000G1_scaffold_304_17
unknown

Not on your lists

comp(18429..18692)
DNA (264bp) protein (88aa)

This feature has no annotations

L3_068_000G1_scaffold_304_18
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18709..20886)
DNA (2178bp) protein (726aa)
Radical SAM protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R713_9CLOT
Radical SAM protein {ECO:0000313|EMBL:EPR14575.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
Radical SAM domain-containing protein
L3_068_000G1_scaffold_304_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21248..21625
DNA (378bp) protein (126aa)
Bacterial mobilization protein MobC n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQL3_9CLOT
Bacterial mobilisation protein (MobC).
Bacterial mobilization protein MobC {ECO:0000313|EMBL:EEA81689.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_068_000G1_scaffold_304_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21612..23258
DNA (1647bp) protein (549aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQL2_9CLOT
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EEA81688.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Relaxase/Mobilisation nuclease domain.
L3_068_000G1_scaffold_304_21
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23308..24225)
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75303.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Abortive infection bacteriophage resistance protein
L3_068_000G1_scaffold_304_22
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24375..25289)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75148.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_068_000G1_scaffold_304_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25286..25537)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81684.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_068_000G1_scaffold_304_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25534..30894)
DNA (5361bp) protein (1787aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQK7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81683.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_068_000G1_scaffold_304_25
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30952..39114)
DNA (8163bp) protein (2721aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75163.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
DNA methylase
L3_068_000G1_scaffold_304_26
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39133..41223)
DNA (2091bp) protein (697aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQD3_9FIRM
L3_068_000G1_scaffold_304_27
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41314..41997)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75165.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_068_000G1_scaffold_304_28
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41987..42325)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=D4LWP4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL22047.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_068_000G1_scaffold_304_29
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42343..44793)
DNA (2451bp) protein (817aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75167.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_068_000G1_scaffold_304_30
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44826..45137)
DNA (312bp) protein (104aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B6FNX9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL22046.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Displaying items 1-30 of 31 in total

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