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L3_068_000G1_scaffold_307

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_307_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(131..790)
DNA (660bp) protein (220aa)
MIP family channel protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WGB9_BACOV
MIP family channel protein {ECO:0000313|EMBL:EFF52527.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
MIP family channel proteins
L3_068_000G1_scaffold_307_2
unknown

Not on your lists

comp(750..917)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_068_000G1_scaffold_307_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1119..2045)
DNA (927bp) protein (309aa)
LysR substrate binding domain family protein n=2 Tax=Bacteroides RepID=D4WGB8_BACOV
LysR substrate binding domain family protein {ECO:0000313|EMBL:EFF52526.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Transcriptional regulator
L3_068_000G1_scaffold_307_4
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2183..2659
DNA (477bp) protein (159aa)
DNA protection during starvation protein n=6 Tax=Bacteroides RepID=C3QQ29_9BACE
Dps family protein {ECO:0000313|EMBL:EFI40884.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
DNA-binding ferritin-like protein (oxidative damage protectant)
L3_068_000G1_scaffold_307_5
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2793..3995)
DNA (1203bp) protein (401aa)
Putative lipoprotein n=2 Tax=Bacteroides RepID=D4WGB6_BACOV
Putative lipoprotein {ECO:0000313|EMBL:CDB60295.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
hypothetical protein
L3_068_000G1_scaffold_307_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4008..5033)
DNA (1026bp) protein (342aa)
Putative lipoprotein n=2 Tax=Bacteroides RepID=D4WGB5_BACOV
Putative lipoprotein {ECO:0000313|EMBL:EFF52523.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
glycosyl hydrolase family 18,F5/8 type C domain-containing protein
L3_068_000G1_scaffold_307_7
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5058..6629)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6KDK7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB60297.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
hypothetical protein
L3_068_000G1_scaffold_307_8
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6657..9944)
DNA (3288bp) protein (1096aa)
TonB-dependent receptor n=2 Tax=Bacteroides RepID=D4WGB3_BACOV
TonB-dependent receptor {ECO:0000313|EMBL:CDB60298.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
SusC/RagA family TonB-linked outer membrane protein
L3_068_000G1_scaffold_307_9
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10121..11110)
DNA (990bp) protein (330aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Bacteroides RepID=D4WGB2_BACOV
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDB60299.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
anti-FecI sigma factor, FecR
L3_068_000G1_scaffold_307_10
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11158..11697)
DNA (540bp) protein (180aa)
RNA polymerase sigma-70 factor n=2 Tax=Bacteroides RepID=D4WGB1_BACOV
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDB60300.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_068_000G1_scaffold_307_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11959..14307)
DNA (2349bp) protein (783aa)
Glycosyl hydrolase family 3 C-terminal domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WGB0_BACOV
Glycosyl hydrolase family 3 C-terminal domain protein {ECO:0000313|EMBL:EFF52518.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
periplasmic beta-glucosidase , xylosidase/arabinosidase
L3_068_000G1_scaffold_307_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14381..15457)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R6JC49_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF52517.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_068_000G1_scaffold_307_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15523..16803)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7M616_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO09699.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_068_000G1_scaffold_307_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16828..18042)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9HY51_BACOV
Putative lipoprotein {ECO:0000313|EMBL:EFF52515.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_068_000G1_scaffold_307_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18065..19150)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8YQJ6_BACOV
Putative lipoprotein {ECO:0000313|EMBL:EFF52514.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Endo-beta-N-acetylglucosaminidase F2
L3_068_000G1_scaffold_307_16
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19175..20788)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=R6KDL9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB60307.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
hypothetical protein
L3_068_000G1_scaffold_307_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20812..24105)
DNA (3294bp) protein (1098aa)
SusC/RagA family TonB-linked outer membrane protein n=4 Tax=Bacteroides RepID=I8YS80_BACOV
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY65402.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_068_000G1_scaffold_307_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24206..24376
DNA (171bp) protein (57aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8YT51_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN01687.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_068_000G1_scaffold_307_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24357..25268)
DNA (912bp) protein (304aa)
Sigma factor regulatory protein, FecR/PupR family n=5 Tax=Bacteroides RepID=D4WGA3_BACOV
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EFF52511.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
anti-sigma factor
L3_068_000G1_scaffold_307_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25372..27363)
DNA (1992bp) protein (664aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8YQK1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY65735.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_068_000G1_scaffold_307_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27537..28100
DNA (564bp) protein (188aa)
RNA polymerase sigma-70 factor n=5 Tax=Bacteroides RepID=A7M609_BACOV
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EFF52509.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_068_000G1_scaffold_307_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28473..29588)
DNA (1116bp) protein (372aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.26)
O-succinylbenzoic acid--CoA ligase family protein n=3 Tax=Bacteroides RepID=D4WGA0_BACOV
O-succinylbenzoic acid--CoA ligase family protein {ECO:0000313|EMBL:EFF52508.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_068_000G1_scaffold_307_23
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29620..30645)
DNA (1026bp) protein (342aa)
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily (EC:4.2.1.113)
O-succinylbenzoate synthase n=3 Tax=Bacteroides RepID=I9T9D9_BACOV
O-succinylbenzoate synthase {ECO:0000313|EMBL:CDB60314.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_068_000G1_scaffold_307_24
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30706..31530)
DNA (825bp) protein (275aa)
1,4-Dihydroxy-2-naphthoate synthase (EC:4.1.3.36)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
1,4-Dihydroxy-2-naphthoate synthase n=12 Tax=Bacteroides RepID=D6D3D8_9BACE
L3_068_000G1_scaffold_307_25
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31534..33201)
DNA (1668bp) protein (556aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase (EC:2.2.1.9 2.5.1.64)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=2 Tax=Bacteroides RepID=D4WG97_BACOV
L3_068_000G1_scaffold_307_26
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33221..34336)
DNA (1116bp) protein (372aa)
isochorismate synthases (EC:5.4.4.2)
Isochorismate synthase n=2 Tax=Bacteroides RepID=D4WG96_BACOV
Isochorismate synthase {ECO:0000313|EMBL:CDB60317.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_068_000G1_scaffold_307_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34333..35565)
DNA (1233bp) protein (411aa)
Cof-like hydrolase n=6 Tax=Bacteroides RepID=A7M602_BACOV
Cof-like hydrolase {ECO:0000313|EMBL:EDO09685.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
uncharacterized domain 1
L3_068_000G1_scaffold_307_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35649..36011)
DNA (363bp) protein (121aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A7M601_BACOV
Uncharacterized protein {ECO:0000313|EMBL:KDS15599.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hypothetical protein
L3_068_000G1_scaffold_307_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36076..37833)
DNA (1758bp) protein (586aa)
Transcriptional regulator, AraC family n=7 Tax=Bacteroides RepID=A7M600_BACOV
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDO09683.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
AraC-type DNA-binding domain-containing proteins
L3_068_000G1_scaffold_307_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37975..38754)
DNA (780bp) protein (260aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7M5Z9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY65415.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Acetyltransferase (GNAT) family.
Displaying items 1-30 of 35 in total

View Taxonomy