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L3_068_000G1_scaffold_313

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_313_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..93)
DNA (93bp) protein (31aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55429.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Transposase.
L3_068_000G1_scaffold_313_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(126..1373)
DNA (1248bp) protein (416aa)
processing peptidase (EC:3.4.24.64)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1C8X8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35155.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_000G1_scaffold_313_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1689..2516)
DNA (828bp) protein (276aa)
Haloacid dehalogenase-like hydrolase n=2 Tax=Clostridiales RepID=G9YPZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35154.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_000G1_scaffold_313_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2516..3796)
DNA (1281bp) protein (427aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35153.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
nucleotide pyrophosphatase
L3_068_000G1_scaffold_313_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3812..4405)
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YPY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35152.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_000G1_scaffold_313_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4497..5243)
DNA (747bp) protein (249aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BRX4_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI80904.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC transporter substrate-binding protein
L3_068_000G1_scaffold_313_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5253..5822)
DNA (570bp) protein (190aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BRX4_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI80904.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_000G1_scaffold_313_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5900..6721)
DNA (822bp) protein (274aa)
ABC transporter, permease protein n=3 Tax=Clostridiales RepID=G9YPY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57230.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
sugar ABC transporter permease
L3_068_000G1_scaffold_313_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6735..7658)
DNA (924bp) protein (308aa)
ABC transporter, permease protein n=3 Tax=Clostridiales RepID=G9YPY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35148.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC transporter permease
L3_068_000G1_scaffold_313_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7655..8707)
DNA (1053bp) protein (351aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C8P3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57228.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
malK; Sugar ABC transporter, ATP-binding protein)
L3_068_000G1_scaffold_313_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9027..9809
DNA (783bp) protein (261aa)
Transcriptional regulator, DeoR family n=3 Tax=Clostridiales RepID=G9YPY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35146.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
deoR; deoxyribose operon repressor
L3_068_000G1_scaffold_313_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10043..12193)
DNA (2151bp) protein (717aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=2 Tax=Clostridiales RepID=G9YPY2_9FIRM
L3_068_000G1_scaffold_313_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12499..12765)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=3 Tax=Clostridiales RepID=G9YPY1_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
30S ribosomal protein S15
L3_068_000G1_scaffold_313_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13008..13523
DNA (516bp) protein (172aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YPX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35143.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_000G1_scaffold_313_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13632..14189
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35142.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_000G1_scaffold_313_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14281..14940
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM52223.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_068_000G1_scaffold_313_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14951..16375
DNA (1425bp) protein (475aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C8N5_9CLOT
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:ERI80890.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_000G1_scaffold_313_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16429..19320)
DNA (2892bp) protein (964aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35139.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
S-layer domain-containing protein
L3_068_000G1_scaffold_313_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19692..21029)
DNA (1338bp) protein (446aa)
Transglutaminase-like protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CDT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57220.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Transglutaminase-like enzymes, putative cysteine proteases
L3_068_000G1_scaffold_313_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21134..24904)
DNA (3771bp) protein (1257aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ANL6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57219.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
peptidase M14 carboxypeptidase A
L3_068_000G1_scaffold_313_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25215..26078)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35136.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Protein of unknown function (DUF3298).
L3_068_000G1_scaffold_313_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26080..26565)
DNA (486bp) protein (162aa)
RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8V8_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_068_000G1_scaffold_313_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26668..27141)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2CJG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO35134.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
lipoprotein
L3_068_000G1_scaffold_313_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27138..28058)
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM52297.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
GDSL-like Lipase/Acylhydrolase.
L3_068_000G1_scaffold_313_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28073..28780)
DNA (708bp) protein (236aa)
HAD superfamily (subfamily IA) hydrolase, TIGR02254 (EC:3.8.1.2)
HAD hydrolase family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPW3_9FIRM
HAD hydrolase family {ECO:0000313|EMBL:EHM52296.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_068_000G1_scaffold_313_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28796..29251)
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57213.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_068_000G1_scaffold_313_27
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29248..30105)
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI67467.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_000G1_scaffold_313_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30048..30830)
DNA (783bp) protein (261aa)
Metal cation transporter, ZIP family n=2 Tax=Clostridiales RepID=G9YPW0_9FIRM
Metal cation transporter, ZIP family {ECO:0000313|EMBL:ERI67466.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
divalent heavy-metal cations transporter
L3_068_000G1_scaffold_313_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30918..31394)
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35127.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_000G1_scaffold_313_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31760..32275)
DNA (516bp) protein (172aa)
Ethanolamine utilization protein, EutP n=3 Tax=Clostridiales RepID=H1C8U9_9FIRM
Ethanolamine utilization protein, EutP {ECO:0000313|EMBL:EHO35126.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Ethanolamine utilization protein
Displaying items 1-30 of 45 in total

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