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L3_068_000G1_scaffold_333

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_333_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..2304
DNA (2304bp) protein (768aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=8 Tax=Clostridium RepID=G5I3I3_9CLOT
L3_068_000G1_scaffold_333_2
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2420..4873
DNA (2454bp) protein (818aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Phosphorylase n=5 Tax=Clostridium clostridioforme RepID=G5I3I2_9CLOT
glycogen/starch/alpha-glucan phosphorylase
L3_068_000G1_scaffold_333_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4918..5808
DNA (891bp) protein (297aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=9 Tax=Clostridium RepID=G5I3I1_9CLOT
L3_068_000G1_scaffold_333_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5851..6501
DNA (651bp) protein (217aa)
Vitamin B12 dependent methionine synthase activation subunit n=9 Tax=Clostridium RepID=N9VKS3_9CLOT
Vitamin B12 dependent methionine synthase activation subunit {ECO:0000313|EMBL:ENZ60953.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Vitamin B12 dependent methionine synthase activation subunit
L3_068_000G1_scaffold_333_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6560..7594
DNA (1035bp) protein (345aa)
Threonine aldolase n=9 Tax=Clostridium RepID=N9VK58_9CLOT
Threonine aldolase {ECO:0000313|EMBL:ENZ60954.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
low specificity L-threonine aldolase
L3_068_000G1_scaffold_333_6
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7616..10069
DNA (2454bp) protein (818aa)
Methionine synthase n=9 Tax=Clostridium RepID=N9YZN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24984.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
homocysteine S-methyltransferase
L3_068_000G1_scaffold_333_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10381..10596
DNA (216bp) protein (72aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WNG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13201.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_068_000G1_scaffold_333_8
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10829..11647
DNA (819bp) protein (273aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WP10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24982.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_068_000G1_scaffold_333_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11683..12573)
DNA (891bp) protein (297aa)
DegV family EDD domain-containing protein n=9 Tax=Clostridium RepID=N9VKS8_9CLOT
DegV family EDD domain-containing protein {ECO:0000313|EMBL:ENZ13199.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_000G1_scaffold_333_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12742..13419
DNA (678bp) protein (226aa)
HAD hydrolase, family IA n=9 Tax=Clostridium RepID=N9VK63_9CLOT
HAD hydrolase, family IA {ECO:0000313|EMBL:ENZ60959.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
HAD-superfamily hydrolase
L3_068_000G1_scaffold_333_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13424..14482
DNA (1059bp) protein (353aa)
Zinc ABC transporter substrate-binding protein n=7 Tax=Clostridium clostridioforme RepID=N9YA33_9CLOT
Zinc ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ60960.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L3_068_000G1_scaffold_333_12
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14519..15295
DNA (777bp) protein (259aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
Zinc ABC transporter ATP-binding protein n=9 Tax=Clostridium RepID=N9WNF8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24978.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L3_068_000G1_scaffold_333_13
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15292..16113
DNA (822bp) protein (274aa)
Zinc ABC transporter permease n=10 Tax=Clostridium RepID=N9WP04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63246.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
ABC-type Mn2+/Zn2+ transport systems, permease components
L3_068_000G1_scaffold_333_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16266..17639
DNA (1374bp) protein (458aa)
TrkH family potassium uptake protein (EC:3.6.3.14)
TrkH family potassium uptake protein n=9 Tax=Clostridium RepID=N9VKT3_9CLOT
TrkH family potassium uptake protein {ECO:0000313|EMBL:ENZ13194.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_068_000G1_scaffold_333_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17655..18320
DNA (666bp) protein (222aa)
Trk system potassium uptake protein TrkA n=6 Tax=Clostridium clostridioforme RepID=N9VK69_9CLOT
Trk system potassium uptake protein TrkA {ECO:0000313|EMBL:ENZ60964.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
K+ transport systems, NAD-binding component
L3_068_000G1_scaffold_333_16
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18612..19454
DNA (843bp) protein (281aa)
MerR family transcriptional regulator n=9 Tax=Clostridium RepID=N9X5U7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63243.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
MerR family transcriptional regulator
L3_068_000G1_scaffold_333_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19536..20576
DNA (1041bp) protein (347aa)
Dihydrodipicolinate reductase n=9 Tax=Clostridium RepID=N9WNF4_9CLOT
Dihydrodipicolinate reductase {ECO:0000313|EMBL:ENZ13191.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
dihydrodipicolinate reductase
L3_068_000G1_scaffold_333_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20916..22040
DNA (1125bp) protein (375aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9WNZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60967.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Putative GTPases (G3E family)
L3_068_000G1_scaffold_333_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22061..23017
DNA (957bp) protein (319aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VKT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13189.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
CobW/HypB/UreG, nucleotide-binding domain.
L3_068_000G1_scaffold_333_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23322..24170
DNA (849bp) protein (283aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9VK74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60969.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
degA; HTH-type transcriptional regulator DegA
L3_068_000G1_scaffold_333_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24549..25511
DNA (963bp) protein (321aa)
3-dehydro-L-gulonate 2-dehydrogenase n=3 Tax=Clostridium RepID=N9XCX5_9CLOT
3-dehydro-L-gulonate 2-dehydrogenase {ECO:0000313|EMBL:ENZ13186.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
2,3-diketo-L-gulonate reductase
L3_068_000G1_scaffold_333_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25636..26766
DNA (1131bp) protein (377aa)
Citrate transporter n=6 Tax=Clostridium clostridioforme RepID=N9WNE9_9CLOT
Citrate transporter {ECO:0000313|EMBL:ENZ60971.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
citrate transporter
L3_068_000G1_scaffold_333_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26783..28432
DNA (1650bp) protein (550aa)
Hydantoinase/oxoprolinase n=8 Tax=Clostridium clostridioforme RepID=N9WNZ1_9CLOT
Hydantoinase/oxoprolinase {ECO:0000313|EMBL:ENZ60972.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hydantoinase/oxoprolinase
L3_068_000G1_scaffold_333_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28402..28794
DNA (393bp) protein (131aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9VKU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60973.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Hydantoinaseoxoprolinase domain-containing protein
L3_068_000G1_scaffold_333_25
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28770..29117
DNA (348bp) protein (116aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VK80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24963.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_068_000G1_scaffold_333_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29333..30199
DNA (867bp) protein (289aa)
NTE family protein n=7 Tax=Clostridium RepID=N9X5V8_9CLOT
NTE family protein {ECO:0000313|EMBL:ENZ60975.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
patatin
L3_068_000G1_scaffold_333_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30600..32309
DNA (1710bp) protein (570aa)
ATP-dependent RNA helicase DeaD n=7 Tax=Clostridium RepID=N9WNE3_9CLOT
ATP-dependent RNA helicase DeaD {ECO:0000313|EMBL:ENZ60976.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
DEAD/DEAH box helicase
L3_068_000G1_scaffold_333_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32401..33180
DNA (780bp) protein (260aa)
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) (EC:1.11.1.10)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WNY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13179.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_068_000G1_scaffold_333_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33191..34285)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9VKV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13178.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_000G1_scaffold_333_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34498..34965
DNA (468bp) protein (156aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=8 Tax=Clostridium clostridioforme RepID=G5I3F3_9CLOT
ybaK/ebsC protein
Displaying items 1-30 of 38 in total

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