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L3_068_000G1_scaffold_368

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_368_1
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..242)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGI2_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06192.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
putative conjugative transposon proteinTn1549-like, CTn4-Orf3
L3_068_000G1_scaffold_368_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(314..538)
DNA (225bp) protein (75aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=D5Q4F4_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK94202.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
L3_068_000G1_scaffold_368_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(553..1473)
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=D5Q4F5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:ENZ58132.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000G1_scaffold_368_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1684..2046)
DNA (363bp) protein (121aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=D5Q4F6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCK87102.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
hypothetical protein
L3_068_000G1_scaffold_368_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2427..3425
DNA (999bp) protein (333aa)
Sulfate ABC transporter, sulfate-binding protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC50_9FIRM
Sulfate ABC transporter, sulfate-binding protein {ECO:0000313|EMBL:EES77344.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sulfate/thiosulfate-binding protein
L3_068_000G1_scaffold_368_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3496..4332
DNA (837bp) protein (279aa)
Sulfate ABC transporter, permease CysT n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC49_9FIRM
Sulfate ABC transporter, permease CysT {ECO:0000313|EMBL:EES77343.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sulfate ABC transporter, permease protein CysT
L3_068_000G1_scaffold_368_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4332..5156
DNA (825bp) protein (275aa)
Sulfate ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN04_9FIRM
Sulfate ABC transporter {ECO:0000313|EMBL:CDD79320.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
sulfate ABC transporter, permease protein CysW
L3_068_000G1_scaffold_368_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5158..6216
DNA (1059bp) protein (353aa)
sulfate ABC transporter, ATP-binding protein (EC:3.6.3.25)
Sulfate ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC47_9FIRM
Sulfate ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EES77341.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_000G1_scaffold_368_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6328..8076
DNA (1749bp) protein (583aa)
Adenylylsulfate reductase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPD7_9FIRM
Adenylylsulfate reductase {ECO:0000313|EMBL:CDD79318.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
adenylylsulfate reductase subunit alpha
L3_068_000G1_scaffold_368_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8073..8387
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC45_9FIRM
Ferredoxin {ECO:0000313|EMBL:CDD79317.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_000G1_scaffold_368_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8418..9536
DNA (1119bp) protein (373aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 2 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC44_9FIRM
L3_068_000G1_scaffold_368_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9538..11178
DNA (1641bp) protein (547aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
sulfate adenylyltransferase subunit 1 (EC:2.7.7.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKA4_9FIRM
L3_068_000G1_scaffold_368_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11848..12102
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77336.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_368_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12181..13032
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77335.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
GDSL-family lipase/acylhydrolase
L3_068_000G1_scaffold_368_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13257..14774
DNA (1518bp) protein (506aa)
ferredoxin hydrogenase, large subunit (EC:1.12.7.2)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77334.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_000G1_scaffold_368_16
unknown

Not on your lists

14713..14838
DNA (126bp) protein (42aa)

This feature has no annotations

L3_068_000G1_scaffold_368_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15224..16324)
DNA (1101bp) protein (367aa)
ApbE family lipoprotein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFR1_9FIRM
ApbE family lipoprotein {ECO:0000313|EMBL:CDD76577.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ApbE family lipoprotein
L3_068_000G1_scaffold_368_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16515..16697
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76579.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_000G1_scaffold_368_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16745..17374
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CER4_9FIRM
L3_068_000G1_scaffold_368_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18107..18610
DNA (504bp) protein (168aa)
50S ribosomal protein L10 n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH62_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LSU ribosomal protein L10P
L3_068_000G1_scaffold_368_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18721..19092
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=2 Tax=Ruminococcus RepID=C6JC35_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LSU ribosomal protein L12P
L3_068_000G1_scaffold_368_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19180..21270
DNA (2091bp) protein (697aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77374.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_000G1_scaffold_368_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21480..25340
DNA (3861bp) protein (1287aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=2 Tax=Ruminococcus RepID=C6JC33_9FIRM
L3_068_000G1_scaffold_368_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25358..29113
DNA (3756bp) protein (1252aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC32_9FIRM
L3_068_000G1_scaffold_368_25
unknown

Not on your lists

29174..29329
DNA (156bp) protein (52aa)

This feature has no annotations

L3_068_000G1_scaffold_368_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29423..31330
DNA (1908bp) protein (636aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC31_9FIRM
Mitogen-activated protein kinase kinase 2 {ECO:0000313|EMBL:CDD77368.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Serine/threonine protein kinase
L3_068_000G1_scaffold_368_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31311..32129
DNA (819bp) protein (273aa)
Serine/threonine protein phosphatase (EC:3.1.3.16)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC30_9FIRM
Serine/threonine phosphatase {ECO:0000313|EMBL:CDD77366.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_068_000G1_scaffold_368_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32143..33372
DNA (1230bp) protein (410aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77364.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_000G1_scaffold_368_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33372..33512
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77362.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LacI family transcriptional regulator
L3_068_000G1_scaffold_368_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33625..34725)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77361.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
Displaying items 1-30 of 35 in total

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