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L3_068_000G1_scaffold_388

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_388_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..1043
DNA (1041bp) protein (347aa)
Asparagine synthetase n=9 Tax=Clostridium RepID=G5HW01_9CLOT
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:ENZ67312.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
asparagine synthase
L3_068_000G1_scaffold_388_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1040..2419)
DNA (1380bp) protein (460aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=8 Tax=Clostridium clostridioforme RepID=N9X121_9CLOT
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ENZ67313.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
response regulator receiver:Metal-dependent phosphohydrolase
L3_068_000G1_scaffold_388_3
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2551..2898
DNA (348bp) protein (116aa)
XRE family transcriptional regulator n=9 Tax=Clostridium RepID=N9WPW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23060.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
XRE family transcriptional regulator protein
L3_068_000G1_scaffold_388_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3090..3443)
DNA (354bp) protein (118aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WXE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18960.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
cupin 2 conserved barrel domain protein
L3_068_000G1_scaffold_388_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3575..4462)
DNA (888bp) protein (296aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VFZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67316.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_000G1_scaffold_388_6
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4698..5900)
DNA (1203bp) protein (401aa)
Metallo-beta-lactamase/flavodoxin n=9 Tax=Clostridium RepID=N9VGN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23057.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
flavodoxin/nitric oxide synthase
L3_068_000G1_scaffold_388_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5965..6141)
DNA (177bp) protein (59aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9X115_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67318.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_000G1_scaffold_388_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6194..7249)
DNA (1056bp) protein (352aa)
Sulfite reductase n=9 Tax=Clostridium RepID=G5HVZ4_9CLOT
Sulfite reductase, subunit C {ECO:0000313|EMBL:ENZ67319.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000G1_scaffold_388_9
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7268..8059)
DNA (792bp) protein (264aa)
Sulfite reductase n=9 Tax=Clostridium RepID=G5HVZ3_9CLOT
Sulfite reductase {ECO:0000313|EMBL:CDF23054.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_068_000G1_scaffold_388_10
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8076..9110)
DNA (1035bp) protein (345aa)
Sulfite reductase n=9 Tax=Clostridium RepID=G5HVZ2_9CLOT
Sulfite reductase {ECO:0000313|EMBL:CDF23053.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
sulfite reductase
L3_068_000G1_scaffold_388_11
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9370..11064)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9VGM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23052.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_068_000G1_scaffold_388_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11104..13362)
DNA (2259bp) protein (753aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9X109_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18968.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Beta-N-acetylglucosaminidase
L3_068_000G1_scaffold_388_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13601..14857)
DNA (1257bp) protein (419aa)
D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 5/6) n=9 Tax=Clostridium RepID=N9WPV9_9CLOT
D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 5/6) {ECO:0000313|EMBL:ENZ18969.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
L3_068_000G1_scaffold_388_14
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15137..16384
DNA (1248bp) protein (416aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=8 Tax=Clostridium RepID=N9WXE3_9CLOT
L3_068_000G1_scaffold_388_15
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16442..17341
DNA (900bp) protein (300aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Pseudouridine synthase n=10 Tax=Clostridium RepID=G5HVY7_9CLOT
L3_068_000G1_scaffold_388_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17348..18925)
DNA (1578bp) protein (526aa)
RNA methylase n=6 Tax=Clostridium clostridioforme RepID=N9VGM2_9CLOT
RNA methylase {ECO:0000313|EMBL:ENZ67327.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
RNA methylase
L3_068_000G1_scaffold_388_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18957..19514)
DNA (558bp) protein (186aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9X103_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67328.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000G1_scaffold_388_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19678..21639)
DNA (1962bp) protein (654aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WPV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18974.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Putative peptidoglycan binding domain./L,D-transpeptidase catalytic domain.
L3_068_000G1_scaffold_388_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21646..22089)
DNA (444bp) protein (148aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9WXD8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18975.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_000G1_scaffold_388_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22146..23507)
DNA (1362bp) protein (454aa)
MATE efflux family protein n=10 Tax=Clostridium RepID=N9VFX4_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ENZ18976.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
putative efflux protein, MATE family
L3_068_000G1_scaffold_388_21
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23561..24697)
DNA (1137bp) protein (379aa)
Sporulation integral membrane protein YtvI n=10 Tax=Clostridium RepID=G5HVY1_9CLOT
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:CDB63968.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
sporulation integral membrane protein YtvI
L3_068_000G1_scaffold_388_22
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24725..25807)
DNA (1083bp) protein (361aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=10 Tax=Clostridium RepID=G5HVY0_9CLOT
L3_068_000G1_scaffold_388_23
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25846..27039)
DNA (1194bp) protein (398aa)
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=10 Tax=Clostridium RepID=N9WPU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63970.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L3_068_000G1_scaffold_388_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27425..27625
DNA (201bp) protein (67aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WXD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67335.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_000G1_scaffold_388_25
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27695..28354
DNA (660bp) protein (220aa)
L-serine dehydratase, iron-sulfur-dependent subunit beta (EC:4.3.1.17)
L-serine dehydratase n=10 Tax=Clostridium RepID=G5HVX7_9CLOT
L-serine dehydratase {ECO:0000313|EMBL:CDF23038.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L3_068_000G1_scaffold_388_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28391..29326
DNA (936bp) protein (312aa)
L-serine dehydratase n=9 Tax=Clostridium RepID=G5HVX6_9CLOT
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:ENZ67337.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
sdhA; L-serine dehydratase, iron-sulfur-dependent subunit alpha
L3_068_000G1_scaffold_388_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29446..31857)
DNA (2412bp) protein (804aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9X0Z2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67338.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000G1_scaffold_388_28
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31832..32731)
DNA (900bp) protein (300aa)
Antibiotic ABC transporter ATP-binding protein n=10 Tax=Clostridium RepID=N9WPU3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25193.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
ABC transporter
L3_068_000G1_scaffold_388_29
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32724..33116)
DNA (393bp) protein (131aa)
GntR family transcriptional regulator n=9 Tax=Clostridium RepID=N9X1E7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63976.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
transcriptional regulator, GntR family
L3_068_000G1_scaffold_388_30
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33356..35095
DNA (1740bp) protein (580aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Putative regulator of cell autolysis (EC:2.7.13.3)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9VFW0_9CLOT
Displaying items 1-30 of 34 in total

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