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L3_068_000G1_scaffold_390

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_390_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(200..1666)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6JJQ9_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF52117.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_068_000G1_scaffold_390_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1776..3206
DNA (1431bp) protein (477aa)
Carbon starvation protein, predicted membrane protein n=9 Tax=Bacteroides RepID=D6D670_9BACE
Carbon starvation protein, predicted membrane protein
Carbon starvation protein {ECO:0000313|EMBL:EFF52118.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_068_000G1_scaffold_390_3
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3203..3433
DNA (231bp) protein (77aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C3QJ45_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK69572.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_068_000G1_scaffold_390_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3438..3923
DNA (486bp) protein (162aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=A7M2Y2_BACOV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDO10089.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_068_000G1_scaffold_390_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4020..6791)
DNA (2772bp) protein (924aa)
Excinuclease ABC, A subunit n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WH58_BACOV
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Excinuclease ABC subunit A
L3_068_000G1_scaffold_390_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6808..8394
DNA (1587bp) protein (529aa)
YngK protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WH59_BACOV
YngK protein {ECO:0000313|EMBL:EFF52122.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_068_000G1_scaffold_390_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8505..9053)
DNA (549bp) protein (183aa)
Chromate transport protein n=11 Tax=Bacteroides RepID=A7M2X9_BACOV
Chromate transport protein {ECO:0000313|EMBL:EFF52123.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Chromate transport protein ChrA
L3_068_000G1_scaffold_390_8
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9179..9721)
DNA (543bp) protein (181aa)
Chromate transport protein n=11 Tax=Bacteroides RepID=A7M2X8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM97220.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
chromate transport protein
L3_068_000G1_scaffold_390_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9718..13728)
DNA (4011bp) protein (1337aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9SP04_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY57598.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
two-component system sensor histidine kinase/response regulator
L3_068_000G1_scaffold_390_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13997..17701)
DNA (3705bp) protein (1235aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7KA28_9BACE
L3_068_000G1_scaffold_390_11
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17876..18628
DNA (753bp) protein (251aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=I9UNR3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM97223.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Putative threonine efflux protein
L3_068_000G1_scaffold_390_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18640..19185
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WH65_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF52128.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_068_000G1_scaffold_390_13
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19186..20052
DNA (867bp) protein (289aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EEO51967.1}; EC=1.1.1.133 {ECO:0000313|EMBL:EEO51967.1};; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=6 Tax=Bacteroides RepID=C3QJ33_9BACE
L3_068_000G1_scaffold_390_14
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20150..21724
DNA (1575bp) protein (525aa)
Peptide chain release factor 3 n=3 Tax=Bacteroides RepID=D6D656_9BACE
bacterial peptide chain release factor 3 (bRF-3)
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_068_000G1_scaffold_390_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21802..22392
DNA (591bp) protein (197aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Bacteroides ovatus RepID=A7M2W9_BACOV
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDO10076.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
RNA polymerase sigma factor, sigma-70 family
L3_068_000G1_scaffold_390_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22403..23242
DNA (840bp) protein (280aa)
Transmembrane sensor n=2 Tax=Bacteroides RepID=D7J7C2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY57591.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
transmembrane sensor
L3_068_000G1_scaffold_390_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24228..24488
DNA (261bp) protein (87aa)
Oxaloacetate decarboxylase, gamma chain. (EC:4.1.1.3)
Sodium pump decarboxylase, gamma subunit n=2 Tax=Bacteroides RepID=C3QNT1_9BACE
Sodium pump decarboxylase, gamma subunit {ECO:0000313|EMBL:EFF50827.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_068_000G1_scaffold_390_18
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24515..26350
DNA (1836bp) protein (612aa)
pyruvate carboxylase subunit B (EC:4.1.1.3 6.4.1.1)
Biotin-requiring enzyme n=2 Tax=Bacteroides RepID=C3QJ27_9BACE
Biotin-requiring enzyme {ECO:0000313|EMBL:EEZ01920.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L3_068_000G1_scaffold_390_19
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26350..27585
DNA (1236bp) protein (412aa)
Oxaloacetate decarboxylase beta chain n=6 Tax=Bacteroides RepID=Q8A729_BACTN
Oxaloacetate decarboxylase beta chain 2 {ECO:0000313|EMBL:EFI36416.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
oxaloacetate decarboxylase subunit beta
L3_068_000G1_scaffold_390_20
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27717..27980
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9A989_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY84315.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L3_068_000G1_scaffold_390_21
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27970..28311
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9UNR8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY84316.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Protein of unknown function (DUF1044).
L3_068_000G1_scaffold_390_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28419..29690)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8Y373_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY57585.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Outer membrane protein
L3_068_000G1_scaffold_390_23
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29739..32771)
DNA (3033bp) protein (1011aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M9T9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM97236.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Cation/multidrug efflux pump
L3_068_000G1_scaffold_390_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32838..33893)
DNA (1056bp) protein (352aa)
RND family efflux transporter, MFP subunit n=6 Tax=Bacteroides RepID=D6D647_9BACE
RND family efflux transporter, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EDO10066.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_068_000G1_scaffold_390_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34228..34737)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8Y5G2_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY57582.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
DNA-binding protein, histone-like, putative
L3_068_000G1_scaffold_390_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34971..35165
DNA (195bp) protein (65aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C3QJ19_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM95816.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L3_068_000G1_scaffold_390_27
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35456..37075)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3QJ18_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO51952.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
DNA primase/helicase
L3_068_000G1_scaffold_390_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37285..38589)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=2 Tax=Bacteroides ovatus RepID=I9HCP8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY57579.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_068_000G1_scaffold_390_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38928..39281)
DNA (354bp) protein (118aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=D0TXP0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM95813.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_068_000G1_scaffold_390_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39601..40032)
DNA (432bp) protein (144aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C3QJ14_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS18320.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
Displaying 30 items

View Taxonomy