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L3_068_000G1_scaffold_433

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_433_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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105..422
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9Q9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78202.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_433_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

540..3194
DNA (2655bp) protein (885aa)
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Cation transport ATPase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLD6_9FIRM
Cation transport ATPase {ECO:0000313|EMBL:CDD79049.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_068_000G1_scaffold_433_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3214..4269
DNA (1056bp) protein (352aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNN2_9FIRM
L3_068_000G1_scaffold_433_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4562..5194
DNA (633bp) protein (211aa)
RNA polymerase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003631711
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EQM98866.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
RNA polymerase sigma factor, sigma-70 family
L3_068_000G1_scaffold_433_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5181..5549
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5M0N8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98865.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_433_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5533..6159
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78197.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_433_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6156..6779
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LVN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98864.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_433_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6932..7276
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9Q2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78195.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_433_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7273..10695
DNA (3423bp) protein (1141aa)
Outer membrane protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9Q1_9FIRM
Outer membrane protein {ECO:0000313|EMBL:EES78194.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Glycosidases
L3_068_000G1_scaffold_433_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11336..12007
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78193.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DNA invertase
L3_068_000G1_scaffold_433_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11946..13100
DNA (1155bp) protein (385aa)
IS605 OrfB family transposase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9P9_9FIRM
IS605 OrfB family transposase {ECO:0000313|EMBL:EES78192.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative transposase
L3_068_000G1_scaffold_433_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13296..14540
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78191.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
proteinase inhibitor I4 serpin
L3_068_000G1_scaffold_433_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14580..15083)
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CMC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79146.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted ATP-dependent endonuclease of the OLD family
L3_068_000G1_scaffold_433_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15816..18446
DNA (2631bp) protein (877aa)
DNA mismatch repair protein MutS n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9P5_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DNA mismatch repair protein MutS
L3_068_000G1_scaffold_433_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18453..20504
DNA (2052bp) protein (684aa)
DNA mismatch repair protein MutL n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMH4_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DNA mismatch repair protein MutL
L3_068_000G1_scaffold_433_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20525..21469
DNA (945bp) protein (315aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN55_9FIRM
L3_068_000G1_scaffold_433_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21565..22839
DNA (1275bp) protein (425aa)
Aluminium resistance protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLQ1_9FIRM
Aluminium resistance protein {ECO:0000313|EMBL:CDD79154.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Cystathionine beta-lyase family protein involved in aluminum resistance
L3_068_000G1_scaffold_433_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22836..24026
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79156.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted flavoproteins
L3_068_000G1_scaffold_433_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24023..25618
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9P0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78183.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized FAD-dependent dehydrogenases
L3_068_000G1_scaffold_433_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25919..26638
DNA (720bp) protein (240aa)
DNA repair protein RadC n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9N9_9FIRM
DNA repair protein RadC {ECO:0000313|EMBL:EES78182.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DNA replication and repair protein RadC
L3_068_000G1_scaffold_433_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26661..27674
DNA (1014bp) protein (338aa)
Cell shape determining protein MreB/Mrl n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN72_9FIRM
Cell shape determining protein MreB/Mrl {ECO:0000313|EMBL:CDD79162.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Actin-like ATPase involved in cell morphogenesis
L3_068_000G1_scaffold_433_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27692..28603
DNA (912bp) protein (304aa)
Cell shape-determining protein MreC n=2 Tax=Ruminococcus RepID=C6J9N7_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
rod shape-determining protein MreC
L3_068_000G1_scaffold_433_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28593..29123
DNA (531bp) protein (177aa)
Rod shape-determining protein MreD n=2 Tax=Ruminococcus RepID=C6J9N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79166.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
rod shape-determining protein MreD
L3_068_000G1_scaffold_433_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29108..32002
DNA (2895bp) protein (965aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9N5_9FIRM
pbpA1; penicillin-binding protein PbpA1
L3_068_000G1_scaffold_433_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32063..32851
DNA (789bp) protein (263aa)
Site-determining protein n=2 Tax=Ruminococcus RepID=C6J9N4_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
septum site-determining protein MinD
L3_068_000G1_scaffold_433_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32877..33164
DNA (288bp) protein (96aa)
Cell division topological specificity factor MinE n=2 Tax=Ruminococcus RepID=C6J9N3_9FIRM
Cell division topological specificity factor {ECO:0000256|SAAS:SAAS00085645}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
cell division topological specificity factor MinE
L3_068_000G1_scaffold_433_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33158..34318
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9N2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78175.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Bacterial cell division membrane protein
L3_068_000G1_scaffold_433_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34315..35514
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78174.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
D-alanyl-D-alanine carboxypeptidase
L3_068_000G1_scaffold_433_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35692..36231
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79175.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_000G1_scaffold_433_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36613..36939
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9M9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79176.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Displaying 30 items

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