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L3_068_000G1_scaffold_446

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_446_1
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(196..651)
DNA (456bp) protein (152aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WES5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24279.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_068_000G1_scaffold_446_2
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(991..1494)
DNA (504bp) protein (168aa)
Carbon-monoxide dehydrogenase small subunit n=9 Tax=Clostridium RepID=N9WF94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24278.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
L3_068_000G1_scaffold_446_3
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1469..2356)
DNA (888bp) protein (296aa)
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs (EC:1.17.1.4)
Xanthine dehydrogenase FAD-binding subunit n=9 Tax=Clostridium RepID=N9WTW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24277.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L3_068_000G1_scaffold_446_4
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2375..4663)
DNA (2289bp) protein (763aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase molybdenum-binding subunit n=8 Tax=Clostridium RepID=N9V8H4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24276.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L3_068_000G1_scaffold_446_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4690..6084)
DNA (1395bp) protein (465aa)
MFS transporter, AGZA family, xanthine/uracil permease n=9 Tax=Clostridium RepID=N9V924_9CLOT
MFS transporter, AGZA family, xanthine/uracil permease {ECO:0000313|EMBL:ENZ59851.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
xanthine/uracil/vitamin C permease
L3_068_000G1_scaffold_446_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6184..7551)
DNA (1368bp) protein (456aa)
Guanine deaminase n=9 Tax=Clostridium RepID=N9WER8_9CLOT
Guanine deaminase {ECO:0000313|EMBL:ENZ13556.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
amidohydrolase
L3_068_000G1_scaffold_446_7
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7918..8592)
DNA (675bp) protein (225aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WF90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24273.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
TrkA-N domain-containing protein
L3_068_000G1_scaffold_446_8
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8648..9940)
DNA (1293bp) protein (431aa)
H(+)-transporting two-sector ATPase (EC:3.6.3.14)
TrkH family potassium uptake protein n=7 Tax=Clostridium RepID=N9WTV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24272.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L3_068_000G1_scaffold_446_9
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10107..11639
DNA (1533bp) protein (511aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9V8G8_9CLOT
L3_068_000G1_scaffold_446_10
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11632..12330
DNA (699bp) protein (233aa)
Two-component system KDP operon response regulator KdpE n=9 Tax=Clostridium RepID=N9V920_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24270.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_068_000G1_scaffold_446_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12354..13454)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9WER3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59845.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Outer membrane efflux protein.
L3_068_000G1_scaffold_446_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13458..14657)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WF84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13564.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_000G1_scaffold_446_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14711..15922)
DNA (1212bp) protein (404aa)
ABC transporter permease n=8 Tax=Clostridium RepID=N9WTV1_9CLOT
ABC transporter permease {ECO:0000313|EMBL:ENZ59843.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ABC-type antimicrobial peptide transport system, permease component
L3_068_000G1_scaffold_446_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15912..16703)
DNA (792bp) protein (264aa)
ABC transporter ATP-binding protein n=9 Tax=Clostridium RepID=N9V8G2_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ59842.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ABC transporter
L3_068_000G1_scaffold_446_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16717..18138)
DNA (1422bp) protein (474aa)
Efflux transporter, RND family, MFP subunit n=9 Tax=Clostridium RepID=N9Y0L0_9CLOT
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ENZ59841.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
RND family efflux transporter MFP subunit
L3_068_000G1_scaffold_446_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18460..19701)
DNA (1242bp) protein (414aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Acetylornithine aminotransferase n=9 Tax=Clostridium RepID=G5I4S9_9CLOT
acetylornithine and succinylornithine aminotransferase
L3_068_000G1_scaffold_446_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19694..20584)
DNA (891bp) protein (297aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=10 Tax=Clostridium RepID=G5I4S8_9CLOT
L3_068_000G1_scaffold_446_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20670..21914)
DNA (1245bp) protein (415aa)
bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein (EC:2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=9 Tax=Clostridium RepID=G5I4S7_9CLOT
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_000G1_scaffold_446_19
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21999..22463)
DNA (465bp) protein (155aa)
Acetyltransferase n=9 Tax=Clostridium RepID=N9V909_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24261.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
RimI; acetyltransferase
L3_068_000G1_scaffold_446_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22535..23575)
DNA (1041bp) protein (347aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=9 Tax=Clostridium RepID=G5I4S5_9CLOT
L3_068_000G1_scaffold_446_21
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23823..25055
DNA (1233bp) protein (411aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=9 Tax=Clostridium RepID=G5I4S4_9CLOT
L3_068_000G1_scaffold_446_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25359..25757)
DNA (399bp) protein (133aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WF75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59834.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_000G1_scaffold_446_23
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25829..27811)
DNA (1983bp) protein (661aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Transketolase n=8 Tax=Clostridium RepID=G5I4S2_9CLOT
transketolase
L3_068_000G1_scaffold_446_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28083..29129
DNA (1047bp) protein (349aa)
Lantibiotic ABC transporter ATP-binding protein n=9 Tax=Clostridium RepID=N9V902_9CLOT
Lantibiotic ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ13576.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC transporter
L3_068_000G1_scaffold_446_25
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29126..29992
DNA (867bp) protein (289aa)
ABC transporter permease n=9 Tax=Clostridium RepID=N9WTG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24255.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_068_000G1_scaffold_446_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29998..31389
DNA (1392bp) protein (464aa)
AraC family transcriptional regulator n=9 Tax=Clostridium RepID=N9WEQ0_9CLOT
AraC family transcriptional regulator {ECO:0000313|EMBL:ENZ13578.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
AraC family transcriptional regulator
L3_068_000G1_scaffold_446_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31462..32475
DNA (1014bp) protein (338aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WF72_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13579.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_000G1_scaffold_446_28
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32585..33277)
DNA (693bp) protein (231aa)
cAMP-binding protein n=9 Tax=Clostridium RepID=N9V8F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24252.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
cAMP-binding protein
L3_068_000G1_scaffold_446_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33387..34778)
DNA (1392bp) protein (464aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Argininosuccinate lyase n=9 Tax=Clostridium RepID=G5I4R6_9CLOT
argininosuccinate lyase
L3_068_000G1_scaffold_446_30
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34799..36100)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:511 RepID=R7PHB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24250.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
Displaying 30 items

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