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L3_068_000G1_scaffold_456

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_456_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..517
DNA (516bp) protein (172aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000313|EMBL:AKE60390.1}; EC=2.7.1.71 {ECO:0000313|EMBL:AKE60390.1};; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
Shikimate kinase 1 n=2 Tax=Enterobacteriaceae RepID=M9W7K0_RAOOR
L3_068_000G1_scaffold_456_2
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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576..1664
DNA (1089bp) protein (363aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TLP9_CITRI
L3_068_000G1_scaffold_456_3
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1762..3036
DNA (1275bp) protein (425aa)
DamX protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TLQ0_CITRI
DamX protein {ECO:0000313|EMBL:GAL50313.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
damX; DamX protein
L3_068_000G1_scaffold_456_4
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3103..3939
DNA (837bp) protein (279aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
DNA adenine methylase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BI11_9ENTR
DNA adenine methylase
L3_068_000G1_scaffold_456_5
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3957..4634
DNA (678bp) protein (226aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3GBR7_ENTLS
L3_068_000G1_scaffold_456_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4627..5385
DNA (759bp) protein (253aa)
Phosphoglycolate phosphatase n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SBC8_CITFR
Phosphoglycolate phosphatase {ECO:0000313|EMBL:AKE60385.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
phosphoglycolate phosphatase
L3_068_000G1_scaffold_456_7
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5378..6382
DNA (1005bp) protein (335aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Tryptophan--tRNA ligase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BI08_9ENTR
tryptophanyl-tRNA synthetase
L3_068_000G1_scaffold_456_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6543..7451
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MD58_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF07905.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
hypothetical protein
L3_068_000G1_scaffold_456_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7467..7829
DNA (363bp) protein (121aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=J0M5M4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC05383.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L3_068_000G1_scaffold_456_10
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7913..9076
DNA (1164bp) protein (388aa)
Alanine racemase, N-terminal domain protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HFJ1_SHIFL
Protein containing an Alanine Racemase Domain {ECO:0000313|EMBL:CEJ64966.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
hypothetical protein
L3_068_000G1_scaffold_456_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9076..10305
DNA (1230bp) protein (410aa)
Mutase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UP18_9ENTR
Mutase {ECO:0000313|EMBL:KJC05381.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
putative mutase
L3_068_000G1_scaffold_456_12
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10302..11180
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AQT1_CITK8
putative hydrolase
Hydrolase {ECO:0000313|EMBL:KGY18725.1}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
L3_068_000G1_scaffold_456_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11191..11544
DNA (354bp) protein (118aa)
Uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=C1MD53_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67330.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L3_068_000G1_scaffold_456_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11556..12860
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MD52_9ENTR
Inner membrane protein {ECO:0000313|EMBL:ETX67329.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L3_068_000G1_scaffold_456_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12871..13974
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UK70_9ENTR
Aminotransferase class-V family protein {ECO:0000313|EMBL:KEL80098.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
yhfS; hypothetical protein
L3_068_000G1_scaffold_456_16
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14079..14246)
DNA (168bp) protein (56aa)
Uncharacterized protein YhfL n=1406 Tax=Enterobacteriaceae RepID=YHFL_ECO57
Uncharacterized protein {ECO:0000313|EMBL:GAL50303.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_000G1_scaffold_456_17
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14490..15863)
DNA (1374bp) protein (458aa)
cysG; siroheme synthase (EC:1.3.1.76 2.1.1.107 4.99.1.4)
Siroheme synthase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TLQ6_CITRI
Siroheme synthase {ECO:0000256|HAMAP-Rule:MF_01646}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
L3_068_000G1_scaffold_456_18
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15875..16684)
DNA (810bp) protein (270aa)
Formate/nitrite transporter n=5 Tax=Citrobacter RepID=D4BI05_9ENTR
Putative nitrite transporter {ECO:0000313|EMBL:GAL50301.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
nitrite transporter NirC
L3_068_000G1_scaffold_456_19
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16863..17189)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AQS2_CITK8
Nitrite reductase small subunit {ECO:0000313|EMBL:GAL50300.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
nirD; nitrite reductase small subunit
L3_068_000G1_scaffold_456_20
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17186..19729)
DNA (2544bp) protein (848aa)
Nitrite reductase [NAD(P)H], large subunit n=1 Tax=Shigella flexneri 1235-66 RepID=I6HFK1_SHIFL
Nitrite reductase large subunit {ECO:0000313|EMBL:GAL50299.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
nitrite reductase
L3_068_000G1_scaffold_456_21
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20083..21264)
DNA (1182bp) protein (394aa)
Protein TsgA homolog n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TMC6_CITRI
Protein TsgA homolog {ECO:0000256|HAMAP-Rule:MF_01044}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
tsgA; major facilitator superfamily protein
L3_068_000G1_scaffold_456_22
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21530..22102
DNA (573bp) protein (191aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
ppiA; peptidyl-prolyl cis-trans isomerase A (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Escherichia fergusonii RepID=B7LS71_ESCF3
L3_068_000G1_scaffold_456_23
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22367..22969
DNA (603bp) protein (201aa)
Cell filamentation protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TMC9_CITRI
Cell filamentation protein Fic {ECO:0000313|EMBL:AKE60377.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
fic; cell filamentation protein
L3_068_000G1_scaffold_456_24
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23001..23564
DNA (564bp) protein (188aa)
Anthranilate synthase component II {ECO:0000313|EMBL:AKE60376.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AKE60376.1};; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
pabA; para-aminobenzoate synthase glutamine amidotransferase component I (EC:2.6.1.85)
Para-aminobenzoate synthase glutamine amidotransferase component I n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TMD0_CITRI
L3_068_000G1_scaffold_456_25
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23650..24867
DNA (1218bp) protein (406aa)
Acetylornithine/succinyldiaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; Short=DapATase {ECO:0000256|HAMAP-Rule:MF_01107};; Short=Succinyldiaminopimelate transferase {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.17 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Acetylornithine/succinyldiaminopimelate aminotransferase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AQR2_CITK8
argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
L3_068_000G1_scaffold_456_26
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24942..27029)
DNA (2088bp) protein (696aa)
Putative membrane protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TMD2_CITRI
Uncharacterized protein {ECO:0000313|EMBL:GAL50292.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_000G1_scaffold_456_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27081..27713)
DNA (633bp) protein (211aa)
cAMP-activated global transcriptional regulator CRP n=796 Tax=cellular organisms RepID=CRP_SALTY
Crp/Fnr family transcriptional regulator
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KJC09014.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L3_068_000G1_scaffold_456_28
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28021..28425
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TMD4_CITRI
Uncharacterized protein {ECO:0000313|EMBL:AKE60372.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L3_068_000G1_scaffold_456_29
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28514..29383)
DNA (870bp) protein (290aa)
prkB; phosphoribulokinase (EC:2.7.1.19)
Phosphoribulokinase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TMD5_CITRI
Phosphoribulokinase {ECO:0000313|EMBL:AKE60371.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
L3_068_000G1_scaffold_456_30
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29438..29656)
DNA (219bp) protein (73aa)
UPF0270 protein YheU n=1328 Tax=Enterobacteriaceae RepID=YHEU_ECO24
UPF0270 protein yheU {ECO:0000256|HAMAP-Rule:MF_00690}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
Displaying items 1-30 of 36 in total

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