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L3_068_000G1_scaffold_457

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_457_1
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..670)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JIK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61105.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
AraC-type DNA-binding domain-containing proteins
L3_068_000G1_scaffold_457_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

861..3902
DNA (3042bp) protein (1014aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Uncharacterized protein n=9 Tax=Clostridium RepID=N9W884_9CLOT
Beta-galactosidase/beta-glucuronidase
L3_068_000G1_scaffold_457_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3990..5372
DNA (1383bp) protein (461aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=7 Tax=Clostridium clostridioforme RepID=N9WJV9_9CLOT
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:ENZ59156.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L3_068_000G1_scaffold_457_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5605..6408
DNA (804bp) protein (268aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9UZA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18297.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transcriptional regulator, AraC family
L3_068_000G1_scaffold_457_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6518..7243)
DNA (726bp) protein (242aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9UZS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59158.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000G1_scaffold_457_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7257..8018)
DNA (762bp) protein (254aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WJB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59159.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000G1_scaffold_457_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8015..9001)
DNA (987bp) protein (329aa)
Lantibiotic ABC transporter ATP-binding protein n=7 Tax=Clostridium clostridioforme RepID=N9W879_9CLOT
Lantibiotic ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ59160.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ABC transporter-like protein
L3_068_000G1_scaffold_457_8
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9209..9919
DNA (711bp) protein (237aa)
Two-component system response regulator n=8 Tax=Clostridium RepID=N9WJV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64073.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
two component transcriptional regulator
L3_068_000G1_scaffold_457_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9916..11262
DNA (1347bp) protein (449aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9UZ98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59162.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ATP-binding protein
L3_068_000G1_scaffold_457_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11425..12027
DNA (603bp) protein (201aa)
50S ribosomal protein L25 n=9 Tax=Clostridium RepID=G5I6N5_9CLOT
General stress protein CTC {ECO:0000256|SAAS:SAAS00023360}; 50S ribosomal protein L25 {ECO:0000256|SAAS:SAAS00023358}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
LSU ribosomal protein L25P
L3_068_000G1_scaffold_457_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12195..12527)
DNA (333bp) protein (111aa)
Dienelactone hydrolase domain protein n=9 Tax=Bacillus cereus RepID=B5V7Y6_BACCE
X-Pro dipeptidyl-peptidase family protein
X-Pro dipeptidyl-peptidase family protein {ECO:0000313|EMBL:AIY84793.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_068_000G1_scaffold_457_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13206..13640
DNA (435bp) protein (145aa)
PTS system, mannose/fructose/sorbose family, IIA component n=9 Tax=Clostridium RepID=N9WJB6_9CLOT
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:ENZ18304.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
PTS system fructose IIA component
L3_068_000G1_scaffold_457_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13781..14986
DNA (1206bp) protein (402aa)
Glucuronyl hydrolase n=9 Tax=Clostridium RepID=N9W876_9CLOT
Glucuronyl hydrolase {ECO:0000313|EMBL:ENZ18305.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
glucuronyl hydrolase
L3_068_000G1_scaffold_457_14
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15016..15507
DNA (492bp) protein (164aa)
PTS system, mannose/fructose/sorbose family, IIB component n=9 Tax=Clostridium RepID=N9WJV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24754.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
PTS system sorbose subIIB component family protein
L3_068_000G1_scaffold_457_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15542..16330
DNA (789bp) protein (263aa)
PTS system N-acetylgalactosamine-specific IIC component n=9 Tax=Clostridium RepID=N9UZ94_9CLOT
PTS system N-acetylgalactosamine-specific IIC component {ECO:0000313|EMBL:ENZ17801.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
PTS system sorbose-specific iic component family protein
L3_068_000G1_scaffold_457_16
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16320..17129
DNA (810bp) protein (270aa)
PTS system N-acetylgalactosamine-specific IID component n=9 Tax=Clostridium RepID=N9UZS0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24752.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L3_068_000G1_scaffold_457_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17311..19356
DNA (2046bp) protein (682aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9WJB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59169.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
heparinase II/III-like family protein
L3_068_000G1_scaffold_457_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19404..20408
DNA (1005bp) protein (335aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9W872_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17804.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
LacI family transcriptional regulator
L3_068_000G1_scaffold_457_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20881..22365
DNA (1485bp) protein (495aa)
ATP-dependent Lon protease, bacterial type (EC:3.4.21.53)
ATP-dependent Lon protease n=6 Tax=Clostridium clostridioforme RepID=N9WJU2_9CLOT
ATP-dependent Lon protease {ECO:0000313|EMBL:ENZ59171.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_000G1_scaffold_457_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22462..23034
DNA (573bp) protein (191aa)
methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63)
Methylated-DNA-[protein]-cysteine S-methyltransferase n=8 Tax=Clostridium RepID=N9UZ86_9CLOT
Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:ENZ59172.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_000G1_scaffold_457_21
unknown

Not on your lists

23347..23610
DNA (264bp) protein (88aa)

This feature has no annotations

L3_068_000G1_scaffold_457_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23907..24044
DNA (138bp) protein (46aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WJB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59174.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_000G1_scaffold_457_23
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24295..24573
DNA (279bp) protein (93aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9W863_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24745.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_068_000G1_scaffold_457_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25123..26181
DNA (1059bp) protein (353aa)
Cobalamin biosynthesis protein CbiK, Co2+ chelatase (EC:4.99.1.3)
Sirohydrochlorin cobaltochelatase n=8 Tax=Clostridium clostridioforme RepID=N9UZ71_9CLOT
Sirohydrochlorin cobaltochelatase {ECO:0000313|EMBL:ENZ17811.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_068_000G1_scaffold_457_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26213..27253
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I6Q0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59178.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000G1_scaffold_457_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27250..28494
DNA (1245bp) protein (415aa)
Iron complex ABC transporter substrate-binding protein n=8 Tax=Clostridium clostridioforme RepID=N9WJ99_9CLOT
Iron complex ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ59179.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L3_068_000G1_scaffold_457_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28573..29589
DNA (1017bp) protein (339aa)
Iron complex ABC transporter permease n=3 Tax=Clostridium RepID=N9ZBH2_9CLOT
Iron complex ABC transporter permease {ECO:0000313|EMBL:ENZ17814.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transporter permease
L3_068_000G1_scaffold_457_28
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29658..30761
DNA (1104bp) protein (368aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
Iron complex ABC transporter ATP-binding protein n=3 Tax=Clostridium RepID=N9XRH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24739.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L3_068_000G1_scaffold_457_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30983..31537
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I6Q4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17816.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Transcriptional regulators
L3_068_000G1_scaffold_457_30
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31650..32024
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R7PKF9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24738.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
LacI family transcriptional regulator
Displaying items 1-30 of 35 in total

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