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L3_068_000G1_scaffold_475

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_475_1
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46..987)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EPL7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94448.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
virulence protein
L3_068_000G1_scaffold_475_2
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(998..1249)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IKV5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES68149.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
virulence protein
L3_068_000G1_scaffold_475_3
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1257..1604)
DNA (348bp) protein (116aa)
Type I restriction-modification system, M subunit n=3 Tax=Bacteroides RepID=C6IKV6_9BACE
Type I restriction-modification system M subunit {ECO:0000313|EMBL:CCX94447.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hsdM; putative type I restriction enzyme methylase
L3_068_000G1_scaffold_475_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1588..2706)
DNA (1119bp) protein (373aa)
Type I restriction-modification system, M subunit n=3 Tax=Bacteroides RepID=C6IKV6_9BACE
hsdM; putative type I restriction enzyme methylase
Type I restriction-modification system M subunit {ECO:0000313|EMBL:CCZ72204.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_068_000G1_scaffold_475_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2711..3415)
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IKV7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72205.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
T5orf172 domain-containing protein
L3_068_000G1_scaffold_475_6
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3429..6209)
DNA (2781bp) protein (927aa)
HsdR family type I site-specific deoxyribonuclease n=2 Tax=Bacteroides RepID=C6IKV8_9BACE
HsdR family type I site-specific deoxyribonuclease {ECO:0000313|EMBL:EES68152.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hsdR; putative type I restriction enzyme R protein
L3_068_000G1_scaffold_475_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6253..6525)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IKV9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72207.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
plasmid maintenance system antidote protein
L3_068_000G1_scaffold_475_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6669..8891)
DNA (2223bp) protein (741aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IKW0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72208.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative transmembrane protein
L3_068_000G1_scaffold_475_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8921..10294)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IKW1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72209.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative ATP/GTP-binding protein
L3_068_000G1_scaffold_475_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10415..10735)
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IKW2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72210.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative DNA-binding protein
L3_068_000G1_scaffold_475_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10841..11224)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UM40_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72211.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_068_000G1_scaffold_475_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11407..15000)
DNA (3594bp) protein (1198aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IKW4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72212.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_068_000G1_scaffold_475_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15056..16156)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IKW5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72213.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_068_000G1_scaffold_475_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16149..16466)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IKW6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72214.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
transcriptional regulator
L3_068_000G1_scaffold_475_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17080..17964
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1G217_BACFG
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAD47895.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000G1_scaffold_475_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18174..22040)
DNA (3867bp) protein (1289aa)
Alpha-xylosidase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64X82_BACFR
Alpha-xylosidase {ECO:0000313|EMBL:BAD47894.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
alpha-xylosidase
L3_068_000G1_scaffold_475_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22497..24491
DNA (1995bp) protein (665aa)
Type III DNA modification enzyme n=3 Tax=Bacteroides fragilis RepID=Q64X83_BACFR
type III DNA modification enzyme
Uncharacterized protein {ECO:0000313|EMBL:EIY50271.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_068_000G1_scaffold_475_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24513..27545
DNA (3033bp) protein (1011aa)
Type III restriction-modification system restriction subunit n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64X84_BACFR
Type III restriction-modification system restriction subunit {ECO:0000313|EMBL:BAD47892.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
type III restriction-modification system restriction subunit
L3_068_000G1_scaffold_475_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27561..29180
DNA (1620bp) protein (540aa)
Pseudouridine synthase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64X85_BACFR
ribosomal large subunit pseudouridine synthase A
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:BAD47891.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000G1_scaffold_475_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29191..30090
DNA (900bp) protein (300aa)
Putative acetyltransferase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64X86_BACFR
putative acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:BAD47890.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000G1_scaffold_475_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30149..33007
DNA (2859bp) protein (953aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64X87_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47889.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000G1_scaffold_475_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33442..34656)
DNA (1215bp) protein (405aa)
mmdB; putative transmembrane methylmalonyl-CoA/oxaloacetate decarboxylase, beta-subunit (EC:4.1.1.41)
Sodium ion-translocating decarboxylase, beta subunit n=9 Tax=Bacteroides RepID=D1JJN1_9BACE
Sodium ion-translocating decarboxylase, beta subunit {ECO:0000313|EMBL:EYB10695.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_068_000G1_scaffold_475_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34668..35105)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LGF6_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY99847.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_000G1_scaffold_475_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35249..35632)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64X91_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47885.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000G1_scaffold_475_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35797..35931)
DNA (135bp) protein (45aa)
Uncharacterized protein n=17 Tax=Bacteroides RepID=E1WQ88_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKA87425.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_068_000G1_scaffold_475_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36151..37746
DNA (1596bp) protein (532aa)
Short-chain fatty acids transporter n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64X92_BACFR
short-chain fatty acids transporter
Short-chain fatty acids transporter {ECO:0000313|EMBL:BAD47884.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000G1_scaffold_475_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37875..40664
DNA (2790bp) protein (930aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I4V7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY99843.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
hypothetical protein
L3_068_000G1_scaffold_475_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40787..41215)
DNA (429bp) protein (143aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=E1WQ85_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYB10687.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_068_000G1_scaffold_475_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41327..42391)
DNA (1065bp) protein (355aa)
dinB; putative DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
DNA polymerase IV n=9 Tax=Bacteroides RepID=DPO4_BACFR
L3_068_000G1_scaffold_475_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42555..43571)
DNA (1017bp) protein (339aa)
Two-component system response regulator n=3 Tax=Bacteroides fragilis RepID=Q64X96_BACFR
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:BAD47880.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
Displaying items 1-30 of 98 in total

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