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L3_068_000G1_scaffold_479

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_479_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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184..801
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JER1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76682.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Domain of unknown function (DUF1836).
L3_068_000G1_scaffold_479_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(899..2851)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM64209.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_068_000G1_scaffold_479_3
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2971..5004)
DNA (2034bp) protein (678aa)
Family 31 glucosidase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FTG8_CLOPA
Family 31 glucosidase {ECO:0000313|EMBL:ETD67186.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
glycoside hydrolase family protein
L3_068_000G1_scaffold_479_4
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(5111..5953)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WFY8_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CDC93107.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
L3_068_000G1_scaffold_479_5
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5955..6854)
DNA (900bp) protein (300aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VG15_9FIRM
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:EXG84533.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
binding-protein-dependent transport system inner membrane protein
L3_068_000G1_scaffold_479_6
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(6885..8141)
DNA (1257bp) protein (419aa)
Extracellular solute-binding protein family 1 n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V7P9_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDC93110.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
extracellular solute-binding protein
L3_068_000G1_scaffold_479_7
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(8361..9110)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VLQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC93111.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
putative AraC family two-component system response regulator
L3_068_000G1_scaffold_479_8
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(9152..10996)
DNA (1845bp) protein (615aa)
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003706E80
Uncharacterized protein {ECO:0000313|EMBL:CDC93112.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
L3_068_000G1_scaffold_479_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11244..13445)
DNA (2202bp) protein (734aa)
Alpha-galactosidase (EC:3.2.1.22)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JER0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76681.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_000G1_scaffold_479_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13480..14145)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DBF3B1
Uncharacterized protein {ECO:0000313|EMBL:EES76680.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted integral membrane protein
L3_068_000G1_scaffold_479_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14344..15168)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76679.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_068_000G1_scaffold_479_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15181..16074)
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76678.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_068_000G1_scaffold_479_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16240..17505)
DNA (1266bp) protein (422aa)
ABC-type sugar transport system n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJP2_9FIRM
ABC-type sugar transport system {ECO:0000313|EMBL:CDD78180.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_068_000G1_scaffold_479_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17593..18654
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76676.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
AraC family transcriptional regulator
L3_068_000G1_scaffold_479_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18738..20957)
DNA (2220bp) protein (740aa)
Alpha-galactosidase (EC:3.2.1.22)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76675.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_000G1_scaffold_479_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21071..22066)
DNA (996bp) protein (332aa)
L-glyceraldehyde 3-phosphate reductase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000319BE08
Uncharacterized protein {ECO:0000313|EMBL:EES76673.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L3_068_000G1_scaffold_479_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22125..22802)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E227_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89467.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_068_000G1_scaffold_479_18
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22804..23244)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7INT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE52968.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
hypothetical protein
L3_068_000G1_scaffold_479_19
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23195..23647)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IMH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE52969.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
hypothetical protein
L3_068_000G1_scaffold_479_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23865..27047)
DNA (3183bp) protein (1061aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEQ1_9FIRM
L3_068_000G1_scaffold_479_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27445..27750)
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76671.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
TrpR-related protein YerC/YecD
L3_068_000G1_scaffold_479_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27988..28710)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76670.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Histidinol phosphatase and related hydrolases of the PHP family
L3_068_000G1_scaffold_479_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28954..29706
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CNU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79909.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
polysaccharide deacetylase
L3_068_000G1_scaffold_479_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29831..30538
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76660.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted integral membrane protein
L3_068_000G1_scaffold_479_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30535..31461
DNA (927bp) protein (309aa)
TIGR01212 family radical SAM protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEN8_9FIRM
TIGR01212 family radical SAM protein {ECO:0000313|EMBL:EES76659.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
radical SAM protein, TIGR01212 family
L3_068_000G1_scaffold_479_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31498..32010
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79913.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_000G1_scaffold_479_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32212..33537
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79915.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPase related to the helicase subunit of the Holliday junction resolvase
Displaying 27 items

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