ggKbase home page

L3_068_000G1_scaffold_495

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_495_1
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..233
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AJE6_CITK8
Uncharacterized protein {ECO:0000313|EMBL:ABV13609.1}; TaxID=290338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696).;"
L3_068_000G1_scaffold_495_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(605..2269)
DNA (1665bp) protein (555aa)
Asparagine synthetase n=4 Tax=Salmonella enterica I RepID=L6XVA5_SALEN
Asparagine synthetase B {ECO:0000313|EMBL:KEY47790.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
asnB; asparagine synthetase B
L3_068_000G1_scaffold_495_3
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2524..3276)
DNA (753bp) protein (251aa)
Putative N-acetylglucosamine metabolism protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TNI1_CITRI
NagD protein {ECO:0000313|EMBL:GAL49420.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
UMP phosphatase
L3_068_000G1_scaffold_495_4
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3323..4543)
DNA (1221bp) protein (407aa)
ROK family protein n=1 Tax=Escherichia coli 2850750 RepID=M8Y200_ECOLX
Transcriptional repressor NagC {ECO:0000313|EMBL:GAL49419.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
nagC; N-acetylglucosamine repressor
L3_068_000G1_scaffold_495_5
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4552..5700)
DNA (1149bp) protein (383aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AJE1_CITK8
nagA; N-acetylglucosamine-6-phosphate deacetylase
L3_068_000G1_scaffold_495_6
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5760..6560)
DNA (801bp) protein (267aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BCE6_9ENTR
nagB; glucosamine-6-phosphate deaminase
L3_068_000G1_scaffold_495_7
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6887..8902
DNA (2016bp) protein (672aa)
PTS N-acetylglucosamine transporter subunit IIABC n=1 Tax=Enterobacter mori RepID=UPI000237CCF8
N-acetylglucosamine-specific phosphotransferase system enzyme II {ECO:0000313|EMBL:GAL49416.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
PTS system N-acetyl glucosamine specific transporter subunits IICBA
L3_068_000G1_scaffold_495_8
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9068..10735
DNA (1668bp) protein (556aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=360 Tax=Salmonella enterica I RepID=SYQ_SALA4
L3_068_000G1_scaffold_495_9
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11162..12568
DNA (1407bp) protein (469aa)
Putative exported protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TNJ0_CITRI
Chitoporin {ECO:0000313|EMBL:KEY47783.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L3_068_000G1_scaffold_495_10
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12618..12950
DNA (333bp) protein (111aa)
Lipoprotein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HG05_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:KEY47782.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
putative lipoprotein
L3_068_000G1_scaffold_495_11
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13003..14298)
DNA (1296bp) protein (432aa)
Citrate-proton symporter n=2 Tax=Escherichia coli RepID=S0TNT1_ECOLX
Citrate transporter CitA {ECO:0000313|EMBL:GAL49412.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
citrate-proton symporter
L3_068_000G1_scaffold_495_12
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14352..15491)
DNA (1140bp) protein (380aa)
CitB domain-containing protein n=2 Tax=Escherichia coli RepID=S0T8L8_ECOLX
Citrate utilization protein B {ECO:0000313|EMBL:GAL49411.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
citrate utilization protein B
L3_068_000G1_scaffold_495_13
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15478..16881)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=5 Tax=Enterobacteriaceae RepID=Q9L5J6_SALTI
Uncharacterized protein {ECO:0000313|EMBL:GAL49410.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
precorrin 3B synthase CobZ
L3_068_000G1_scaffold_495_14
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16979..17905)
DNA (927bp) protein (309aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=S0TI84_ECOLX
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:GAL49409.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
LysR family transcriptional regulator
L3_068_000G1_scaffold_495_15
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18037..18483)
DNA (447bp) protein (149aa)
Ferric uptake regulation protein n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=D2ZGT4_9ENTR
Ferric uptake regulation protein {ECO:0000313|EMBL:GAL49408.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
fur; ferric uptake regulator
L3_068_000G1_scaffold_495_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18764..19294)
DNA (531bp) protein (177aa)
Flavodoxin n=11 Tax=Citrobacter RepID=D4BCD6_9ENTR
flavodoxin FldA
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L3_068_000G1_scaffold_495_17
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19444..19737)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AJC8_CITK8
Uncharacterized protein {ECO:0000313|EMBL:GAL49406.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
LexA regulated protein
L3_068_000G1_scaffold_495_18
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19866..20639)
DNA (774bp) protein (258aa)
Esterase ybfF n=1 Tax=Citrobacter sp. KTE151 RepID=R8WZM3_9ENTR
Esterase YbfF {ECO:0000313|EMBL:GAL49405.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
ybfF; hypothetical protein
L3_068_000G1_scaffold_495_19
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20831..21376
DNA (546bp) protein (182aa)
Negative modulator of initiation of replication n=8 Tax=Citrobacter RepID=C1M8Y2_9ENTR
Negative modulator of initiation of replication {ECO:0000256|HAMAP-Rule:MF_00908, ECO:0000256|PIRNR:PIRNR019401}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_000G1_scaffold_495_20
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21400..23040
DNA (1641bp) protein (547aa)
Phosphoglucomutase {ECO:0000313|EMBL:KEY47772.1}; EC=5.4.2.2 {ECO:0000313|EMBL:KEY47772.1};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
Phosphoglucomutase n=2 Tax=Salmonella bongori RepID=F8VE54_SALBC
pgm; phosphoglucomutase
L3_068_000G1_scaffold_495_21
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23190..23621)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000374328F
Uncharacterized protein {ECO:0000313|EMBL:AKE58192.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L3_068_000G1_scaffold_495_22
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23890..25209)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AJC4_CITK8
Putrescine/ornithine antiporter {ECO:0000313|EMBL:GAL49402.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
potE; putrescine transporter
L3_068_000G1_scaffold_495_23
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25206..27482)
DNA (2277bp) protein (759aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AJC3_CITK8
Ornithine decarboxylase, inducible {ECO:0000313|EMBL:KDF04542.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
ornithine decarboxylase
L3_068_000G1_scaffold_495_24
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28044..28721)
DNA (678bp) protein (226aa)
Two-component response regulator n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TNK4_CITRI
Two-component response regulator KdpE {ECO:0000313|EMBL:GAL49400.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
kdpE; two-component response regulator
L3_068_000G1_scaffold_495_25
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28718..31405)
DNA (2688bp) protein (896aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AJC0_CITK8
sensor protein KdpD
L3_068_000G1_scaffold_495_26
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31405..31971)
DNA (567bp) protein (189aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SGY6_CITFR
L3_068_000G1_scaffold_495_27
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31980..33122)
DNA (1143bp) protein (381aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Potassium-transporting ATPase B chain n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AJB8_CITK8
potassium-transporting ATPase subunit B
Displaying 27 items

View Taxonomy