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L3_068_000G1_scaffold_834

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_834_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..603)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=2 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LXL5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY92966.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L3_068_000G1_scaffold_834_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1099..4458
DNA (3360bp) protein (1120aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=Q650J9_BACFR
Uncharacterized protein {ECO:0000313|EMBL:EXZ85512.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
hypothetical protein
L3_068_000G1_scaffold_834_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4475..5089
DNA (615bp) protein (205aa)
Polysaccharide deacetylase n=12 Tax=Bacteroides RepID=Q650K0_BACFR
putative polysaccharide deacetylase
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EXY42894.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
L3_068_000G1_scaffold_834_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5089..6018
DNA (930bp) protein (310aa)
Epoxyqueuosine reductase {ECO:0000313|EMBL:EXY42893.1}; EC=1.-.-.- {ECO:0000313|EMBL:EXY42893.1};; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
Putative iron-sulfur cluster-binding protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JQB4_9BACE
putative iron-sulfur cluster-binding protein
L3_068_000G1_scaffold_834_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6052..7323)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9VBS0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ00621.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
hypothetical protein
L3_068_000G1_scaffold_834_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7323..8114)
DNA (792bp) protein (264aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6I300_9BACE
gno; putative gluconate 5-dehydrogenase
Short chain dehydrogenase family protein {ECO:0000313|EMBL:EXZ07505.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
L3_068_000G1_scaffold_834_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8181..9023)
DNA (843bp) protein (281aa)
putative 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=7 Tax=Bacteroides RepID=KDUI_BACFN
L3_068_000G1_scaffold_834_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9156..10736)
DNA (1581bp) protein (527aa)
Choline-sulfatase n=5 Tax=Bacteroides RepID=Q650K5_BACFR
choline-sulfatase
Type I phosphodiesterase / nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:EYA41305.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
L3_068_000G1_scaffold_834_9
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11060..11218
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:47 RepID=R6ZQ52_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD43161.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_068_000G1_scaffold_834_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11297..14569
DNA (3273bp) protein (1091aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6I303_9BACE
Putative peptidase/protease family protein {ECO:0000313|EMBL:CAH05858.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
putative peptidase/protease family protein
L3_068_000G1_scaffold_834_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14683..15975)
DNA (1293bp) protein (431aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
Tyrosine--tRNA ligase n=6 Tax=Bacteroides RepID=E1WJV7_BACF6
tyrS; putative tyrosyl-tRNA synthetase 1
L3_068_000G1_scaffold_834_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16043..16678)
DNA (636bp) protein (212aa)
TatD-related DNase n=13 Tax=Bacteroides RepID=Q650K8_BACFR
putative tatD-related DNAse protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ00615.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_000G1_scaffold_834_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16685..16906)
DNA (222bp) protein (74aa)
Putative membrane protein insertion efficiency factor n=15 Tax=Bacteroides RepID=YIDD_BACFN
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_068_000G1_scaffold_834_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16903..17283)
DNA (381bp) protein (127aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
Ribonuclease P protein component n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LJ21_9BACE
ribonuclease P component
L3_068_000G1_scaffold_834_15
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17374..18126)
DNA (753bp) protein (251aa)
Possible uroporphyrinogen-III synthase n=14 Tax=Bacteroides RepID=E1WJV3_BACF6
uroporphyrinogen-III synthase
Possible uroporphyrinogen-III synthase {ECO:0000313|EMBL:CDD43155.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_068_000G1_scaffold_834_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18131..18961)
DNA (831bp) protein (277aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C6I309_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ00611.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_000G1_scaffold_834_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18958..19545)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LJ18_9BACE
Putative lysine decarboxylase family protein {ECO:0000313|EMBL:EXY86736.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
putative lysine decarboxylase
L3_068_000G1_scaffold_834_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19686..20978)
DNA (1293bp) protein (431aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; S-adenosylmethionine synthase; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
S-adenosylmethionine synthase n=7 Tax=Bacteroides RepID=METK_BACFN
metK; putative S-adenosylmethionine synthetase
L3_068_000G1_scaffold_834_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21187..21381
DNA (195bp) protein (65aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=Q650L5_BACFR
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EXZ55779.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_068_000G1_scaffold_834_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21361..21822)
DNA (462bp) protein (154aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:EXY42877.1}; EC=2.7.6.3 {ECO:0000313|EMBL:EXY42877.1};; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine n=12 Tax=Bacteroides RepID=Q650L6_BACFR
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
L3_068_000G1_scaffold_834_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21826..22599)
DNA (774bp) protein (258aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=4 Tax=Bacteroides RepID=E4VWX0_BACFG
putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
L3_068_000G1_scaffold_834_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22647..23348)
DNA (702bp) protein (234aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
tRNA pseudouridine synthase B n=14 Tax=Bacteroides RepID=TRUB_BACFN
putative tRNA pseudouridine synthase
L3_068_000G1_scaffold_834_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23356..24156)
DNA (801bp) protein (267aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
Undecaprenyl-diphosphatase n=5 Tax=Bacteroides RepID=UPPP_BACFR
putative undecaprenol kinase
L3_068_000G1_scaffold_834_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24163..24396)
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=K1G644_BACFG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ00603.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_000G1_scaffold_834_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24437..25318)
DNA (882bp) protein (294aa)
Cell division protein FtsX n=14 Tax=Bacteroides RepID=E1WJU4_BACF6
ftsX; putative cell division protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
L3_068_000G1_scaffold_834_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25318..26217)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q650M2_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD46802.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000G1_scaffold_834_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26367..28376)
DNA (2010bp) protein (670aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HQS0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EYA21644.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
hypothetical protein
L3_068_000G1_scaffold_834_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28451..29494)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=Q650M4_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ00599.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_000G1_scaffold_834_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29574..30617)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=Q650M5_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD46799.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000G1_scaffold_834_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30655..31710)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=4 Tax=Bacteroides fragilis RepID=Q5LJ50_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY86723.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
Displaying items 1-30 of 32 in total

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