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L3_068_000G1_scaffold_32

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Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_32_1
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1229..3076
DNA (1848bp) protein (616aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BVW3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42738.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
cell wall binding protein
L3_068_000G1_scaffold_32_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3209..5680)
DNA (2472bp) protein (824aa)
Glycosyl transferase family 2 n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z840_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72881.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
family 2 glycosyl transferase
L3_068_000G1_scaffold_32_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5837..6736
DNA (900bp) protein (300aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3Z4_9ACTN
L3_068_000G1_scaffold_32_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6832..7269
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNB5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72911.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_068_000G1_scaffold_32_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7279..8253
DNA (975bp) protein (325aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECX3_9ACTN
Conserved domain protein {ECO:0000313|EMBL:EBA38593.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_068_000G1_scaffold_32_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8329..9348
DNA (1020bp) protein (340aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGY5_9ACTN
rmlB1; rhamnose biosynthesis dTDP-glucose 4,6-dehydratase
L3_068_000G1_scaffold_32_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9470..10924
DNA (1455bp) protein (485aa)
Putative dTDP-4-dehydrorhamnose reductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECX5_9ACTN
Putative dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EBA38595.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase
L3_068_000G1_scaffold_32_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11027..11998)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3Y8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73090.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
family 2 glycosyl transferase
L3_068_000G1_scaffold_32_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12159..13004
DNA (846bp) protein (282aa)
ABC-2 type transporter n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNB0_9ACTN
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L3_068_000G1_scaffold_32_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13016..13783
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECE6_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA38677.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L3_068_000G1_scaffold_32_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14220..15221)
DNA (1002bp) protein (334aa)
translation initiation factor 2 n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B573C4
Uncharacterized protein {ECO:0000313|EMBL:KGI72813.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_068_000G1_scaffold_32_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15221..15670)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNB5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73087.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_068_000G1_scaffold_32_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15801..16238)
DNA (438bp) protein (146aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
3-dehydroquinate dehydratase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECE7_9ACTN
dehydroquinase class II
L3_068_000G1_scaffold_32_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16340..17578)
DNA (1239bp) protein (413aa)
Shikimate kinase {ECO:0000313|EMBL:EBA38679.1}; EC=2.7.1.71 {ECO:0000313|EMBL:EBA38679.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Shikimate kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECE8_9ACTN
shikimate kinase
L3_068_000G1_scaffold_32_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17579..18724)
DNA (1146bp) protein (382aa)
Chorismate mutase (EC:5.4.99.5)
Prephenate dehydratase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAH6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73084.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_068_000G1_scaffold_32_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18778..19875)
DNA (1098bp) protein (366aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Chorismate synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGX7_9ACTN
chorismate synthase
L3_068_000G1_scaffold_32_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19877..21196)
DNA (1320bp) protein (440aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECF1_9ACTN
3-phosphoshikimate 1-carboxyvinyltransferase
L3_068_000G1_scaffold_32_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21190..22296)
DNA (1107bp) protein (369aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECF2_9ACTN
L3_068_000G1_scaffold_32_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22333..23247)
DNA (915bp) protein (305aa)
Prephenate dehydrogenase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNA1_9ACTN
Prephenate dehydrogenase {ECO:0000313|EMBL:KGI73080.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
prephenate dehydrogenase
L3_068_000G1_scaffold_32_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23251..24276)
DNA (1026bp) protein (342aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EBA38685.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EBA38685.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECF4_9ACTN
L3_068_000G1_scaffold_32_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24631..27354
DNA (2724bp) protein (908aa)
E1-E2 ATPase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGX3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73078.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
P-type HAD superfamily ATPase
L3_068_000G1_scaffold_32_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27458..28600
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z825_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73077.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_068_000G1_scaffold_32_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28708..29250
DNA (543bp) protein (181aa)
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type n=2 Tax=Collinsella RepID=A4ECF9_9ACTN
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type {ECO:0000313|EMBL:EBA38690.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
cyclophilin type peptidyl-prolyl cis-trans isomerase
L3_068_000G1_scaffold_32_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29262..30566
DNA (1305bp) protein (435aa)
Tetratricopeptide repeat protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZN95_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73075.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_068_000G1_scaffold_32_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30682..31725
DNA (1044bp) protein (348aa)
Cell shape determining protein MreB/Mrl family n=2 Tax=Collinsella RepID=R5ZAG6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73074.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
rod shape-determining protein MreB
L3_068_000G1_scaffold_32_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31804..32745
DNA (942bp) protein (314aa)
Cell shape-determining protein MreC n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECG2_9ACTN
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
rod shape-determining protein MreC
L3_068_000G1_scaffold_32_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32757..33323
DNA (567bp) protein (189aa)
Putative rod shape-determining protein MreD n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z820_9ACTN
Putative rod shape-determining protein MreD {ECO:0000313|EMBL:CDA35833.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
rod shape-determining protein MreD
L3_068_000G1_scaffold_32_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33337..35406
DNA (2070bp) protein (690aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 2 n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3W4_9ACTN
Penicillin-binding protein 2 {ECO:0000313|EMBL:CDA35832.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_068_000G1_scaffold_32_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35416..36642
DNA (1227bp) protein (409aa)
Cell cycle protein FtsW/RodA/SpoVE family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZN90_9ACTN
Cell cycle protein FtsW/RodA/SpoVE family {ECO:0000313|EMBL:CDA35831.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
cell elongation-specific peptidoglycan biosynthesis regulator RodA
L3_068_000G1_scaffold_32_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36661..37590
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECG7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38698.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
Displaying items 1-30 of 118 in total

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