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L3_068_000G1_scaffold_739

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_739_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1..99)
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A637_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36557.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_068_000G1_scaffold_739_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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950..3988
DNA (3039bp) protein (1013aa)
Peptidase M16 inactive domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNZ9_9ACTN
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:CDA36091.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Peptidase M16C associated domain-containing protein
L3_068_000G1_scaffold_739_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(4298..5953)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMC8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35471.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_068_000G1_scaffold_739_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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6431..6760
DNA (330bp) protein (110aa)
HicB family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB87_9ACTN
HicB family protein {ECO:0000313|EMBL:CDA36090.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
HicB
L3_068_000G1_scaffold_739_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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6907..7503
DNA (597bp) protein (199aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T0_9ACTN
L3_068_000G1_scaffold_739_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(7671..8633)
DNA (963bp) protein (321aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T1_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA39599.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_068_000G1_scaffold_739_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(9077..10003)
DNA (927bp) protein (309aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Homoserine O-succinyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T3_9ACTN
homoserine O-succinyltransferase
L3_068_000G1_scaffold_739_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10215..11192
DNA (978bp) protein (326aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Putative L-lactate dehydrogenase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75666.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_068_000G1_scaffold_739_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11572..12540)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39603.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
sugar isomerase
L3_068_000G1_scaffold_739_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(12685..13440)
DNA (756bp) protein (252aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHR1_9ACTN
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:CDA36084.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
GntR family transcriptional regulator
L3_068_000G1_scaffold_739_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13443..15419)
DNA (1977bp) protein (659aa)
ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
Putative ATP-dependent DNA helicase RecQ n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75662.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_068_000G1_scaffold_739_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15873..16592)
DNA (720bp) protein (240aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A582_9ACTN
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:CDA36287.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Transcriptional regulators
L3_068_000G1_scaffold_739_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16697..17704)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5Z9B5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36288.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_068_000G1_scaffold_739_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(17804..18433)
DNA (630bp) protein (210aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9U2_9ACTN
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EBA39610.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_068_000G1_scaffold_739_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18589..19572)
DNA (984bp) protein (328aa)
SIS domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBM0_9ACTN
SIS domain protein {ECO:0000313|EMBL:CDA36290.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Predicted phosphosugar isomerases
L3_068_000G1_scaffold_739_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(19770..20603)
DNA (834bp) protein (278aa)
PTS system mannose/fructose/sorbose family IID component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9U4_9ACTN
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:EBA39612.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
PTS system IID component, Man family (TC 4.A.6)
L3_068_000G1_scaffold_739_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20617..21411)
DNA (795bp) protein (265aa)
PTS system sorbose-specific iic component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9U5_9ACTN
PTS system sorbose-specific iic component {ECO:0000313|EMBL:EBA39613.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L3_068_000G1_scaffold_739_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21448..22371)
DNA (924bp) protein (308aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
PTS system fructose IIA component n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9B9_9ACTN
PTS system fructose IIA component {ECO:0000313|EMBL:CDA36293.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_068_000G1_scaffold_739_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22554..23636)
DNA (1083bp) protein (361aa)
Putative membrane protein n=2 Tax=Collinsella RepID=R5ZI65_9ACTN
Putative membrane protein {ECO:0000313|EMBL:CDA36294.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transporter
L3_068_000G1_scaffold_739_20
unknown

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comp(23799..23864)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 20 items

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