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L3_068_000M1_scaffold_11442

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_11442_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1692)
DNA (1692bp) protein (564aa)
CHAP domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KP21_9FIRM
CHAP domain.
CHAP domain {ECO:0000313|EMBL:CBL08623.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000M1_scaffold_11442_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1707..2111)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KP19_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05012.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_068_000M1_scaffold_11442_3
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2127..2810)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GB71_9FIRM
trsE; TrsE-like protein (VirB4)
TrsE-like protein {ECO:0000313|EMBL:AIK22016.1}; TaxID=1328 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus anginosus.;"
L3_068_000M1_scaffold_11442_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2906..4366)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=3 Tax=root RepID=C6JA59_9FIRM
Domain of unknown function DUF87.
Uncharacterized protein {ECO:0000313|EMBL:EES78352.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_000M1_scaffold_11442_5
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(4350..4610)
DNA (261bp) protein (87aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=C6JA60_9FIRM
conserved hypothetical protein
Type IV secretion operon-associated protein {ECO:0000313|EMBL:AIK22060.1}; Uncharacterized protein {ECO:0000313|EMBL:AIK71186.1}; TaxID=1311 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae.;"
L3_068_000M1_scaffold_11442_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4631..5461)
DNA (831bp) protein (277aa)
Uncharacterized protein n=4 Tax=root RepID=C6JA61_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES78354.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_000M1_scaffold_11442_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5553..5909)
DNA (357bp) protein (119aa)
VirB2-like protein n=2 Tax=Firmicutes RepID=Q6WRZ8_ENTFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08618.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000M1_scaffold_11442_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5924..6520)
DNA (597bp) protein (199aa)
Type IV secretory pathway, VirD4 components n=2 Tax=root RepID=D4KP15_9FIRM
Type IV secretory pathway, VirD4 components
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CBL08617.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000M1_scaffold_11442_9
unknown

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6527..6778
DNA (252bp) protein (84aa)

This feature has no annotations

L3_068_000M1_scaffold_11442_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6775..7644)
DNA (870bp) protein (290aa)
Type IV secretory pathway, VirD4 components n=2 Tax=root RepID=D4KP15_9FIRM
Type IV secretory pathway, VirD4 components
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CBL08617.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000M1_scaffold_11442_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7631..7828)
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C6JA64_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES78357.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_000M1_scaffold_11442_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7844..8707)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KP13_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08615.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000M1_scaffold_11442_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8714..9526)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KP12_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08614.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000M1_scaffold_11442_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9468..10085)
DNA (618bp) protein (206aa)
Relaxase/Mobilisation nuclease domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KP11_9FIRM
Relaxase/Mobilisation nuclease domain.
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CBL08613.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Displaying 14 items

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