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L3_068_000M1_scaffold_2028

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2028_1
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(188..538)
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R9I738_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS09165.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
integrase
L3_068_000M1_scaffold_2028_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(563..691)
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R9I738_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDO08932.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
integrase
L3_068_000M1_scaffold_2028_3
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(663..1118)
DNA (456bp) protein (152aa)
Site-specific recombinase, phage integrase family n=8 Tax=root RepID=E4MEM1_9BACT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFR56657.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
integrase
L3_068_000M1_scaffold_2028_4
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1553..2791
DNA (1239bp) protein (413aa)
Peptidase M16 inactive domain protein n=3 Tax=Alistipes RepID=E4MEL3_9BACT
Zn-dependent peptidase
Putative Zn-dependent peptidase {ECO:0000313|EMBL:AFL76573.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2028_5
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2788..4092
DNA (1305bp) protein (435aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EFR56654.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFR56654.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Peptidase M16 inactive domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MEL2_9BACT
Zn-dependent peptidase
L3_068_000M1_scaffold_2028_6
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4315..5466)
DNA (1152bp) protein (384aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Alistipes sp. HGB5 RepID=E4MEL1_9BACT
dimethyladenosine transferase
L3_068_000M1_scaffold_2028_7
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5468..5671)
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4MEL0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ75395.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
acetyltransferase
L3_068_000M1_scaffold_2028_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6081..6305)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MEK9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56602.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_068_000M1_scaffold_2028_9
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6543..6761)
DNA (219bp) protein (73aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YHV9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75393.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_068_000M1_scaffold_2028_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6842..8914)
DNA (2073bp) protein (691aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EFR56610.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFR56610.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
ATP-dependent DNA helicase RecQ n=1 Tax=Alistipes sp. HGB5 RepID=E4MEK7_9BACT
ATP-dependent DNA helicase RecQ
L3_068_000M1_scaffold_2028_11
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9184..10407
DNA (1224bp) protein (408aa)
Phosphate-selective porin O and P n=2 Tax=Alistipes RepID=I3YHW1_ALIFI
Phosphate-selective porin O and P
Phosphate-selective porin O and P {ECO:0000313|EMBL:AFL76579.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2028_12
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10708..11496
DNA (789bp) protein (263aa)
ABC-type (Unclassified) transport system, ATPase component n=3 Tax=Alistipes RepID=I3YHW2_ALIFI
ABC transporter ATPase
ABC-type (Unclassified) transport system, ATPase component {ECO:0000313|EMBL:AFL76580.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2028_13
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11568..12812
DNA (1245bp) protein (415aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240533};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHW3_ALIFI
L3_068_000M1_scaffold_2028_14
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12817..13791
DNA (975bp) protein (325aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Chorismate synthase n=1 Tax=Alistipes sp. HGB5 RepID=E4MEK3_9BACT
L3_068_000M1_scaffold_2028_15
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13791..14633
DNA (843bp) protein (281aa)
Protein-(Glutamine-N5) methyltransferase, release factor-specific {ECO:0000313|EMBL:EFR56624.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFR56624.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Alistipes sp. HGB5 RepID=E4MEK2_9BACT
protein-(glutamine-N5) methyltransferase
L3_068_000M1_scaffold_2028_16
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14615..15133
DNA (519bp) protein (173aa)
Regulatory protein RecX n=1 Tax=Alistipes sp. HGB5 RepID=E4MEK1_9BACT
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_068_000M1_scaffold_2028_17
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15118..16845
DNA (1728bp) protein (576aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UAK0_9BACT
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:CCZ75258.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
metalloendopeptidase-like membrane protein
L3_068_000M1_scaffold_2028_18
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16902..17285
DNA (384bp) protein (128aa)
CheY-like receiver domain-containing protein n=2 Tax=Alistipes RepID=I3YHW8_ALIFI
CheY-like receiver domain-containing protein
CheY-like receiver domain-containing protein {ECO:0000313|EMBL:AFL76586.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2028_19
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17168..17704)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YI26_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76644.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2028_20
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


17814..18368
DNA (555bp) protein (185aa)
30S ribosomal protein S16 n=3 Tax=Alistipes RepID=I3YI27_ALIFI
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_068_000M1_scaffold_2028_21
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18581..19246
DNA (666bp) protein (222aa)
Ribosome maturation factor RimM n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YI28_ALIFI
hypothetical protein
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2028_22
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19262..20578
DNA (1317bp) protein (439aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Alistipes sp. HGB5 RepID=E4MEJ6_9BACT
L3_068_000M1_scaffold_2028_23
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20678..21052
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UAK4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ75263.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_068_000M1_scaffold_2028_24
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21229..21456
DNA (228bp) protein (76aa)
Helix-turn-helix protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UHR9_9BACT
Helix-turn-helix protein {ECO:0000313|EMBL:CCZ75264.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Helix-turn-helix protein
L3_068_000M1_scaffold_2028_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21467..22417
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MEJ3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56640.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_068_000M1_scaffold_2028_26
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22589..25318
DNA (2730bp) protein (910aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EFR56592.1}; EC=2.7.9.1 {ECO:0000313|EMBL:EFR56592.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=2 Tax=Alistipes RepID=I3YI33_ALIFI
L3_068_000M1_scaffold_2028_27
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25508..25975
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4MEJ0_9BACT
Conserved domain protein {ECO:0000313|EMBL:CCZ76912.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
Displaying 27 items

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