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L3_068_000M1_scaffold_2141

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2141_1
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(306..953)
DNA (648bp) protein (216aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Superoxide dismutase n=1 Tax=Alistipes sp. HGB5 RepID=E4ME94_9BACT
superoxide dismutase
L3_068_000M1_scaffold_2141_2
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(969..1136)
DNA (168bp) protein (56aa)
Rubredoxin n=3 Tax=Alistipes RepID=I3YJU0_ALIFI
rubredoxin
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_068_000M1_scaffold_2141_3
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1262..2638
DNA (1377bp) protein (459aa)
Tryptophanase n=3 Tax=Alistipes RepID=I3YJU1_ALIFI
tryptophanase
Tryptophanase {ECO:0000313|EMBL:AFL77259.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2141_4
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2934..4028)
DNA (1095bp) protein (365aa)
Glycosyl hydrolase family 18 n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJU5_ALIFI
glycosyl hydrolase family 18
Glycosyl hydrolase family 18 {ECO:0000313|EMBL:AFL77263.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2141_5
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4021..4503)
DNA (483bp) protein (161aa)
Putative lipoprotein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UZM8_9BACT
Putative lipoprotein {ECO:0000313|EMBL:CCZ76521.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
glycosyl hydrolase family 18
L3_068_000M1_scaffold_2141_6
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4507..5862)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4ME90_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56756.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_068_000M1_scaffold_2141_7
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5871..6800)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4ME89_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56749.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_068_000M1_scaffold_2141_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6806..8404)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YJU8_ALIFI
Uncharacterized protein {ECO:0000313|EMBL:EFR56763.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_068_000M1_scaffold_2141_9
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8408..10528)
DNA (2121bp) protein (707aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V777_9BACT
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CCZ76517.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
SusC/RagA family TonB-linked outer membrane protein
L3_068_000M1_scaffold_2141_10
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10510..11586)
DNA (1077bp) protein (359aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJU9_ALIFI
SusC/RagA family TonB-linked outer membrane protein
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AFL77267.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2141_11
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11773..12729)
DNA (957bp) protein (319aa)
Fe2+-dicitrate sensor, membrane component n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJV0_ALIFI
Fe2+-dicitrate sensor membrane protein
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:AFL77268.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2141_12
unknown

Not on your lists

12881..13123
DNA (243bp) protein (81aa)

This feature has no annotations

L3_068_000M1_scaffold_2141_13
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13251..13835
DNA (585bp) protein (195aa)
RNA polymerase sigma-70 factor, Bacteroides expansion family 1 n=3 Tax=Alistipes RepID=I3YJV1_ALIFI
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor Bacteroides expansion family 1 {ECO:0000313|EMBL:CCZ76515.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_068_000M1_scaffold_2141_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14021..15013)
DNA (993bp) protein (331aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Aspartate-semialdehyde dehydrogenase n=3 Tax=Alistipes RepID=I3YJV2_ALIFI
aspartate-semialdehyde dehydrogenase
L3_068_000M1_scaffold_2141_15
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15143..17548)
DNA (2406bp) protein (802aa)
Membrane carboxypeptidase/penicillin-binding protein n=2 Tax=Alistipes RepID=I3YJV3_ALIFI
Membrane carboxypeptidase/penicillin-binding protein {ECO:0000313|EMBL:CCZ76513.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
membrane carboxypeptidase/penicillin-binding protein
L3_068_000M1_scaffold_2141_16
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17589..20561)
DNA (2973bp) protein (991aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4ME82_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56761.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_068_000M1_scaffold_2141_17
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20562..20909)
DNA (348bp) protein (116aa)
Translation initiation factor eIF-1/SUI1-like protein n=3 Tax=Alistipes RepID=I3YJV5_ALIFI
translation initiation factor eIF-1/SUI1-like protein
Translation initiation factor eIF-1/SUI1-like protein {ECO:0000313|EMBL:AFL77273.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2141_18
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21335..22426
DNA (1092bp) protein (364aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YJV6_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77274.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2141_19
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22612..23865)
DNA (1254bp) protein (418aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Aspartokinase n=3 Tax=Alistipes RepID=I3YJV7_ALIFI
L3_068_000M1_scaffold_2141_20
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24017..26158)
DNA (2142bp) protein (714aa)
Serine protease S9A family peptidase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V770_9BACT
Serine protease S9A family peptidase {ECO:0000313|EMBL:CCZ76507.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
serine protease, S9A family peptidase
L3_068_000M1_scaffold_2141_21
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26270..27097
DNA (828bp) protein (276aa)
Putative 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=2 Tax=Alistipes RepID=E4ME76_9BACT
tetrahydrodipicolinate N-succinyltransferase
Putative 2 3 4 5-tetrahydropyridine-2 6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:CCZ76506.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_068_000M1_scaffold_2141_22
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27145..27897
DNA (753bp) protein (251aa)
Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EFR56764.1}; EC=6.3.4.15 {ECO:0000313|EMBL:EFR56764.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Alistipes sp. HGB5 RepID=E4ME75_9BACT
biotin-(acetyl-CoA-carboxylase) ligase BirA
L3_068_000M1_scaffold_2141_23
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27936..28361
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJW2_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77280.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2141_24
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28319..29092
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5ULD9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76504.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_068_000M1_scaffold_2141_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29208..30479)
DNA (1272bp) protein (424aa)
Virulence factor MVIN n=1 Tax=Alistipes sp. HGB5 RepID=E4ME73_9BACT
Virulence factor MVIN {ECO:0000313|EMBL:EFR56745.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
membrane protein
L3_068_000M1_scaffold_2141_26
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30757..32022)
DNA (1266bp) protein (422aa)
Nucleotide sugar dehydrogenase n=1 Tax=Alistipes sp. HGB5 RepID=E4ME72_9BACT
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EFR56757.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
nucleotide sugar dehydrogenase
L3_068_000M1_scaffold_2141_27
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32003..32119)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V765_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76502.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_068_000M1_scaffold_2141_28
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32116..32481)
DNA (366bp) protein (122aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Alistipes sp. HGB5 RepID=E4ME71_9BACT
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EFR56765.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
Displaying 28 items

View Taxonomy