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L3_068_000M1_scaffold_2511

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2511_1
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(463..1470)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIB8_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76736.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2511_2
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1618..3738)
DNA (2121bp) protein (707aa)
Peptidase family M3 {ECO:0000313|EMBL:EFR56775.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFR56775.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Peptidase family M3 n=1 Tax=Alistipes sp. HGB5 RepID=E4ME27_9BACT
Zn-dependent oligopeptidase
L3_068_000M1_scaffold_2511_3
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3775..5904)
DNA (2130bp) protein (710aa)
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:AFL76738.1}; EC=3.4.15.5 {ECO:0000313|EMBL:AFL76738.1};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
peptidyl-dipeptidase Dcp (EC:3.4.15.5)
Peptidyl-dipeptidase Dcp n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIC0_ALIFI
L3_068_000M1_scaffold_2511_4
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6042..6755
DNA (714bp) protein (238aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Alistipes sp. HGB5 RepID=E4ME29_9BACT
RsmE family RNA methyltransferase
L3_068_000M1_scaffold_2511_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6782..8767
DNA (1986bp) protein (662aa)
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIC2_ALIFI
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit {ECO:0000313|EMBL:AFL76740.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
L3_068_000M1_scaffold_2511_6
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8770..9684
DNA (915bp) protein (305aa)
Formate hydrogenlyase subunit 4 n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIC3_ALIFI
formate hydrogenlyase subunit 4
Formate hydrogenlyase subunit 4 {ECO:0000313|EMBL:AFL76741.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2511_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9681..10310
DNA (630bp) protein (210aa)
Hydrogenase 4 membrane component (E) n=3 Tax=Alistipes RepID=I3YIC4_ALIFI
hydrogenase 4 membrane component (E)
Hydrogenase 4 membrane component (E) {ECO:0000313|EMBL:AFL76742.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2511_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10315..11715
DNA (1401bp) protein (467aa)
NADH-ubiquinone/plastoquinone (Complex I) family protein n=1 Tax=Alistipes sp. HGB5 RepID=E4ME33_9BACT
NADH-ubiquinone/plastoquinone (Complex I) family protein {ECO:0000313|EMBL:EFR56770.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
L3_068_000M1_scaffold_2511_9
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11712..13223
DNA (1512bp) protein (504aa)
Respiratory-chain NADH dehydrogenase 49 kD subunit n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UCQ4_9BACT
Respiratory-chain NADH dehydrogenase 49 kD subunit {ECO:0000313|EMBL:CCZ75800.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Ni,Fe-hydrogenase III large subunit
L3_068_000M1_scaffold_2511_10
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13235..13999
DNA (765bp) protein (255aa)
Ni,Fe-hydrogenase III small subunit n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIC7_ALIFI
Ni,Fe-hydrogenase III small subunit
Ni,Fe-hydrogenase III small subunit {ECO:0000313|EMBL:AFL76745.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2511_11
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14002..14544
DNA (543bp) protein (181aa)
Chromate transport protein ChrA n=3 Tax=Alistipes RepID=I3YIC8_ALIFI
chromate transport protein ChrA
Chromate transport protein {ECO:0000313|EMBL:CCZ75802.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_068_000M1_scaffold_2511_12
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14541..15113
DNA (573bp) protein (191aa)
Chromate transport protein ChrA n=3 Tax=Alistipes RepID=I3YIC9_ALIFI
chromate transport protein ChrA
Chromate transport protein ChrA {ECO:0000313|EMBL:CCZ75803.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_068_000M1_scaffold_2511_13
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15184..15471)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4ME38_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56832.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_068_000M1_scaffold_2511_14
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15484..16512)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4ME39_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56798.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
SAM-dependent methyltransferase
L3_068_000M1_scaffold_2511_15
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16525..19578)
DNA (3054bp) protein (1018aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Beta-galactosidase/beta-glucuronidase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YID1_ALIFI
beta-galactosidase/beta-glucuronidase
L3_068_000M1_scaffold_2511_16
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19588..21417)
DNA (1830bp) protein (610aa)
Collagenase-like protease n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V0Y1_9BACT
Collagenase-like protease {ECO:0000313|EMBL:CCZ77006.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
collagenase-like protease
L3_068_000M1_scaffold_2511_17
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23055..24320
DNA (1266bp) protein (422aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase {ECO:0000313|EMBL:AFL76752.1}; EC=6.1.1.11 {ECO:0000313|EMBL:AFL76752.1};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Seryl-tRNA synthetase n=2 Tax=Alistipes RepID=I3YID4_ALIFI
L3_068_000M1_scaffold_2511_18
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24332..24499
DNA (168bp) protein (56aa)
4Fe-4S protein n=3 Tax=Alistipes RepID=I3YID5_ALIFI
4Fe-4S binding protein
4Fe-4S protein {ECO:0000313|EMBL:CCZ77003.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_068_000M1_scaffold_2511_19
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24577..25272)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YID6_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76754.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_2511_20
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25706..28078)
DNA (2373bp) protein (791aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YID7_ALIFI
Uncharacterized protein {ECO:0000313|EMBL:AFL76755.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
hypothetical protein
Displaying 20 items

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