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L3_068_000M1_scaffold_1262

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1262_1
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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451..717
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MY01_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE62668.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_068_000M1_scaffold_1262_2
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(916..3213)
DNA (2298bp) protein (766aa)
Phospholipase patatin family n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JFX5_9BACT
Phospholipase patatin family {ECO:0000313|EMBL:CDE62666.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L3_068_000M1_scaffold_1262_3
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3287..4312
DNA (1026bp) protein (342aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY03_9BACT
L3_068_000M1_scaffold_1262_4
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4513..6276
DNA (1764bp) protein (588aa)
Tetratricopeptide repeat protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JFE7_9BACT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDE62664.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_068_000M1_scaffold_1262_5
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6279..7472
DNA (1194bp) protein (398aa)
Peptidase M23 family n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JGC0_9BACT
Peptidase M23 family {ECO:0000313|EMBL:CDE62663.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Membrane-bound metallopeptidase
L3_068_000M1_scaffold_1262_6
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7479..7925
DNA (447bp) protein (149aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Endoribonuclease YbeY n=2 Tax=Alistipes RepID=B0MY06_9BACT
conserved hypothetical protein TIGR00043
L3_068_000M1_scaffold_1262_7
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8236..9027)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY09_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS02598.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_068_000M1_scaffold_1262_8
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9045..10937
DNA (1893bp) protein (631aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JFX1_9BACT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
glucose-inhibited division protein A
L3_068_000M1_scaffold_1262_9
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11208..12221)
DNA (1014bp) protein (338aa)
Branched-chain-amino-acid transaminase n=3 Tax=root RepID=B0MY11_9BACT
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:CDE62660.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
branched-chain amino acid aminotransferase
L3_068_000M1_scaffold_1262_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(12270..14312)
DNA (2043bp) protein (681aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Methionine--tRNA ligase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JGB3_9BACT
hypothetical protein
L3_068_000M1_scaffold_1262_11
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14530..16299)
DNA (1770bp) protein (590aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EDS02602.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDS02602.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY13_9BACT
single-stranded-DNA-specific exonuclease RecJ
L3_068_000M1_scaffold_1262_12
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16308..16949)
DNA (642bp) protein (214aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Octanoyltransferase n=2 Tax=Alistipes RepID=B0MY14_9BACT
lipoate-protein ligase B
L3_068_000M1_scaffold_1262_13
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17094..17999)
DNA (906bp) protein (302aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Lipoyl synthase n=3 Tax=root RepID=B0MY15_9BACT
lipoate synthase
L3_068_000M1_scaffold_1262_14
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18231..19253)
DNA (1023bp) protein (341aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JFW1_9BACT
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDE62651.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_068_000M1_scaffold_1262_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19527..20150)
DNA (624bp) protein (208aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.170)
Ribosomal RNA small subunit methyltransferase G n=2 Tax=Alistipes RepID=B0MY17_9BACT
L3_068_000M1_scaffold_1262_16
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20226..20789)
DNA (564bp) protein (188aa)
Sigma-70 region 2 n=2 Tax=Alistipes RepID=B0MY18_9BACT
Sigma-70 region 2 {ECO:0000313|EMBL:CDE62646.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
RNA polymerase sigma factor, sigma-70 family
L3_068_000M1_scaffold_1262_17
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20780..21934)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JFN1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE62645.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
glycosyl transferase family protein
L3_068_000M1_scaffold_1262_18
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22187..23113)
DNA (927bp) protein (309aa)
Transcriptional regulator AraC family n=2 Tax=root RepID=R7JIC0_9BACT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE62642.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
transcriptional regulator
L3_068_000M1_scaffold_1262_19
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23275..24249)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JFC0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE62639.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_068_000M1_scaffold_1262_20
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24921..25517
DNA (597bp) protein (199aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=2 Tax=Alistipes RepID=B0MY25_9BACT
L3_068_000M1_scaffold_1262_21
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25806..26414)
DNA (609bp) protein (203aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=3 Tax=root RepID=B0MY26_9BACT
L3_068_000M1_scaffold_1262_22

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comp(26433..27056)
DNA (624bp) protein (208aa)
Non-canonical purine NTP pyrophosphatase n=2 Tax=root RepID=B0MY27_9BACT
Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family {ECO:0000313|EMBL:EKC67919.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
L3_068_000M1_scaffold_1262_23
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27138..27980)
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=root RepID=B0MY28_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS02617.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
phosphoserine phosphatase
Displaying 23 items

View Taxonomy