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L3_068_000M1_scaffold_1358

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1358_1
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..324)
DNA (324bp) protein (108aa)
DNA methyltransferase n=1 Tax=Alistipes onderdonkii RepID=UPI00035C4852
site-specific DNA methylase
C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:EFR58260.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_068_000M1_scaffold_1358_2
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(269..1249)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037934CA
Phosphoadenosine phosphosulfate reductase family protein {ECO:0000313|EMBL:EFR58830.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
PP-loop domain-containing protein
L3_068_000M1_scaffold_1358_3
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1191..2087)
DNA (897bp) protein (299aa)
D12 class N6 adenine-specific DNA methyltransferase (Fragment) n=2 Tax=Alistipes RepID=E4M7Y9_9BACT
D12 class N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:EFR58919.1}; Flags: Fragment;; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
site-specific DNA methylase
L3_068_000M1_scaffold_1358_4
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2084..2776)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003716968
Uncharacterized protein {ECO:0000313|EMBL:CEN54442.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
L3_068_000M1_scaffold_1358_5
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2773..3267)
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4MB11_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57869.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_068_000M1_scaffold_1358_6
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3264..3713)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MB12_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57865.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_068_000M1_scaffold_1358_7
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3733..6921)
DNA (3189bp) protein (1063aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
dnaG_1; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Alistipes sp. HGB5 RepID=E4MB13_9BACT
L3_068_000M1_scaffold_1358_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6979..7185)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MB14_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57870.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_068_000M1_scaffold_1358_9
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7188..7373)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MB15_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57848.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_068_000M1_scaffold_1358_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7385..7594)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MB16_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57822.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_068_000M1_scaffold_1358_11
unknown

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comp(7689..7973)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003822CD7
L3_068_000M1_scaffold_1358_12
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8109..8522
DNA (414bp) protein (138aa)
DNA-binding helix-turn-helix protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MB17_9BACT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFR57832.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_068_000M1_scaffold_1358_13
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9212..9709)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YND4_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78502.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_1358_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9835..9999
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YND5_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78503.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_1358_15
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10069..12156)
DNA (2088bp) protein (696aa)
Thiol:disulfide interchange protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YND6_ALIFI
thiol:disulfide interchange protein
Thiol:disulfide interchange protein {ECO:0000313|EMBL:AFL78504.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_1358_16
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12231..13127
DNA (897bp) protein (299aa)
Glycosyltransferase, group 2 family protein n=2 Tax=Alistipes RepID=E4MB21_9BACT
glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AFL78505.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_1358_17
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13177..14178)
DNA (1002bp) protein (334aa)
Sugar kinase ribokinase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UBC5_9BACT
Sugar kinase ribokinase {ECO:0000313|EMBL:CCZ75315.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
sugar kinase
L3_068_000M1_scaffold_1358_18
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14206..15135)
DNA (930bp) protein (310aa)
6-phosphofructokinase (EC:2.7.1.11)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
6-phosphofructokinase n=3 Tax=Alistipes RepID=I3YND9_ALIFI
L3_068_000M1_scaffold_1358_19
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15269..16588)
DNA (1320bp) protein (440aa)
PspC domain protein n=2 Tax=Alistipes RepID=E4MB24_9BACT
PspC domain protein {ECO:0000313|EMBL:CCZ75313.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
stress-responsive transcriptional regulator
L3_068_000M1_scaffold_1358_20
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16607..17410)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YNE1_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78509.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_1358_21
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17433..17765)
DNA (333bp) protein (111aa)
Transcriptional regulator, PadR family n=3 Tax=Alistipes RepID=E4MB26_9BACT
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFL78510.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_1358_22
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17770..17979)
DNA (210bp) protein (70aa)
PspC domain protein n=3 Tax=Alistipes RepID=E4MB27_9BACT
stress-responsive transcriptional regulator
PspC domain protein {ECO:0000313|EMBL:EFR57828.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_068_000M1_scaffold_1358_23
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17984..18496)
DNA (513bp) protein (171aa)
PspC domain protein n=2 Tax=Alistipes RepID=E4MB28_9BACT
PspC domain protein {ECO:0000313|EMBL:EFR57821.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
stress-responsive transcriptional regulator
L3_068_000M1_scaffold_1358_24
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18745..19242
DNA (498bp) protein (166aa)
Sigma-70 region 2 n=1 Tax=Alistipes sp. HGB5 RepID=E4MB29_9BACT
Sigma-70 region 2 {ECO:0000313|EMBL:EFR57859.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
sigma-70 family RNA polymerase sigma factor
L3_068_000M1_scaffold_1358_25
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19239..19736
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UAP3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ75308.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_068_000M1_scaffold_1358_26
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19749..20687
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YNE7_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78515.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_068_000M1_scaffold_1358_27
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20711..21664
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MB32_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57861.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_068_000M1_scaffold_1358_28
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21681..22160
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YNE9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75305.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_068_000M1_scaffold_1358_29
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22449..22667)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MB34_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57826.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_068_000M1_scaffold_1358_30
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22961..23704)
DNA (744bp) protein (248aa)
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit {ECO:0000313|EMBL:EFR57825.1}; EC=1.3.99.1 {ECO:0000313|EMBL:EFR57825.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit n=2 Tax=Alistipes RepID=E4MB35_9BACT
succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
Displaying items 1-30 of 64 in total

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