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L3_068_000M1_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 173 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_21_1
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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138..695
DNA (558bp) protein (186aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16)
Ribonuclease Y n=1 Tax=Clostridium sp. CAG:217 RepID=R6IP23_9CLOT
L3_068_000M1_scaffold_21_2
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

746..1039
DNA (294bp) protein (98aa)
Stress responsive alpha-beta barrel domain-containing protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JPR6_9CLOT
Stress responsive alpha-beta barrel domain-containing protein {ECO:0000313|EMBL:CDB52077.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
stress-responsive alpha/beta-barrel domain-containing protein
L3_068_000M1_scaffold_21_3
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1256..1984
DNA (729bp) protein (243aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J2Z1_9CLOT
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:CDB52076.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
lipopolysaccharide biosynthesis protein
L3_068_000M1_scaffold_21_4
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1987..2751
DNA (765bp) protein (255aa)
capsular exopolysaccharide family (EC:2.7.10.2)
Capsular exopolysaccharide family n=1 Tax=Clostridium sp. CAG:217 RepID=R6IS69_9CLOT
Capsular exopolysaccharide family {ECO:0000313|EMBL:CDB52075.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_068_000M1_scaffold_21_5
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2770..4266
DNA (1497bp) protein (499aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J030_9CLOT
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CDB52074.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_068_000M1_scaffold_21_6
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4278..5408
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IP18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52073.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
glycosyltransferase
L3_068_000M1_scaffold_21_7
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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5466..6668
DNA (1203bp) protein (401aa)
Glycosyltransferase n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4IWR0_BUTFI
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CBK75203.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
L3_068_000M1_scaffold_21_8
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6696..7715
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6ISI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52210.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Predicted Fe-S oxidoreductases
L3_068_000M1_scaffold_21_9
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7721..9295
DNA (1575bp) protein (525aa)
4-diphosphocytidyl-2-methyl-D-erythritol synthase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J3A8_9CLOT
4-diphosphocytidyl-2-methyl-D-erythritol synthase {ECO:0000313|EMBL:CDB52211.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
cytidylyltransferase
L3_068_000M1_scaffold_21_10
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9292..10134
DNA (843bp) protein (281aa)
LPS biosynthesis protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JQ34_9CLOT
LPS biosynthesis protein {ECO:0000313|EMBL:CDB52212.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
LPS biosynthesis protein
L3_068_000M1_scaffold_21_11
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10131..11099
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 PF5_9CLOT">RepID=R6IPF5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52213.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_068_000M1_scaffold_21_12
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11096..12193
DNA (1098bp) protein (366aa)
Glycosyltransferase Family 4 n=1 Tax=Clostridium sp. CAG:217 RepID=R6J0J0_9CLOT
Glycosyltransferase Family 4 {ECO:0000313|EMBL:CDB52214.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Glycosyltransferase Family 4
L3_068_000M1_scaffold_21_13
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12198..13301
DNA (1104bp) protein (368aa)
Polysaccharide pyruvyl transferase n=1 Tax=Clostridium sp. CAG:217 RepID=R6ISI5_9CLOT
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:CDB52215.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
polysaccharide pyruvyl transferase
L3_068_000M1_scaffold_21_14
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13298..14476
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J3B3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52216.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
coenzyme F420-reducing hydrogenase, beta subunit
L3_068_000M1_scaffold_21_15
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14473..15390
DNA (918bp) protein (306aa)
Glycosyl transferase family 2 n=1 Tax=Clostridium sp. CAG:217 RepID=R6JQ39_9CLOT
Glycosyl transferase family 2 {ECO:0000313|EMBL:CDB52217.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
glycosyl transferase family 2
L3_068_000M1_scaffold_21_16
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15380..16669
DNA (1290bp) protein (430aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IPG0_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDB52218.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_068_000M1_scaffold_21_17
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16666..18216
DNA (1551bp) protein (517aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Clostridium sp. CAG:217 RepID=R6J0J8_9CLOT
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:CDB52219.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L3_068_000M1_scaffold_21_18
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18608..19987)
DNA (1380bp) protein (460aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.97.-.- 1.4.1.13 1.4.1.14)
Sulfide dehydrogenase (Flavoprotein) subunit SudA n=1 Tax=Clostridium sp. CAG:217 RepID=R6J4B0_9CLOT
Sulfide dehydrogenase (Flavoprotein) subunit SudA {ECO:0000313|EMBL:CDB52596.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_068_000M1_scaffold_21_19
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19987..20823)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JLI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB50882.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
L3_068_000M1_scaffold_21_20
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20911..21579)
DNA (669bp) protein (223aa)
PHP domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IKL3_9CLOT
PHP domain protein {ECO:0000313|EMBL:CDB50883.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
PHP domain-containing protein
L3_068_000M1_scaffold_21_21
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21713..24430
DNA (2718bp) protein (906aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IWU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB50884.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_068_000M1_scaffold_21_22
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24485..28237)
DNA (3753bp) protein (1251aa)
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC n=1 Tax=Clostridium sp. CAG:217 RepID=R6INJ3_9CLOT
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC {ECO:0000313|EMBL:CDB50885.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L3_068_000M1_scaffold_21_23
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28314..28778)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB50886.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
glycerol-3-phosphate cytidylyltransferase
L3_068_000M1_scaffold_21_24
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28821..30164)
DNA (1344bp) protein (448aa)
Glycosyl/glycerophosphate transferase teichoic acid biosynthesis n=1 Tax=Clostridium sp. CAG:217 RepID=R6JLJ3_9CLOT
Glycosyl/glycerophosphate transferase teichoic acid biosynthesis {ECO:0000313|EMBL:CDB50887.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
glycosyl/glycerophosphate transferase, teichoic acid biosynthesis
L3_068_000M1_scaffold_21_25
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30343..31857
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IKL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB50888.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Poly(glycerophosphate) glycerophosphotransferase family protein
L3_068_000M1_scaffold_21_26
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31881..33797
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IWU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB50889.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Poly(glycerophosphate) glycerophosphotransferase family protein
L3_068_000M1_scaffold_21_27
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33942..34478
DNA (537bp) protein (179aa)
Putative stage V sporulation protein T n=1 Tax=Clostridium sp. CAG:217 RepID=R6INJ8_9CLOT
Putative stage V sporulation protein T {ECO:0000313|EMBL:CDB50890.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
transcriptional regulator, AbrB family
L3_068_000M1_scaffold_21_28
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34626..35459
DNA (834bp) protein (278aa)
Predicted membrane protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZQ3_9CLOT
Predicted membrane protein {ECO:0000313|EMBL:CDB50891.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Predicted membrane protein
L3_068_000M1_scaffold_21_29
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35648..36127)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:217 RepID=R6JLK0_9CLOT
hypothetical protein
L3_068_000M1_scaffold_21_30
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36124..36912)
DNA (789bp) protein (263aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IKM6_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDB50893.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
putative metal dependent hydrolase
Displaying items 1-30 of 173 in total

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