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L3_068_000M1_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_35_1
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(386..2287)
DNA (1902bp) protein (634aa)
Two-component system sensor histidine kinase/response regulator, hybrid n=4 Tax=Bacteroidales RepID=A6LHN4_PARD8
Two-component system sensor histidine kinase/response regulator hybrid {ECO:0000313|EMBL:CDB50692.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
two-component system sensor histidine kinase/response regulator
L3_068_000M1_scaffold_35_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2850..3782
DNA (933bp) protein (311aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=C7X5F9_9PORP
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABR45197.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_068_000M1_scaffold_35_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4774..5157
DNA (384bp) protein (128aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LHN2_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU53128.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_068_000M1_scaffold_35_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5260..7185
DNA (1926bp) protein (642aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z0Y8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN20347.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L3_068_000M1_scaffold_35_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7210..8427
DNA (1218bp) protein (406aa)
Riboflavin biosynthesis protein RibBA n=9 Tax=Bacteroidales RepID=RIBBA_PARD8
3,4-dihydroxy-2-butanone 4-phosphate synthase
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_068_000M1_scaffold_35_6
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8509..9702
DNA (1194bp) protein (398aa)
Aspartate aminotransferase n=5 Tax=Bacteroidales RepID=A6LHM9_PARD8
aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:EFI10455.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_068_000M1_scaffold_35_7
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9858..10847)
DNA (990bp) protein (330aa)
Elongation factor Ts n=6 Tax=Bacteroidales RepID=EFTS_PARD8
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_068_000M1_scaffold_35_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(10992..11828)
DNA (837bp) protein (279aa)
30S ribosomal protein S2 n=10 Tax=Bacteroidales RepID=RS2_PARD8
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_068_000M1_scaffold_35_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(11969..12355)
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=9 Tax=Bacteroidales RepID=RS9_PARD8
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_068_000M1_scaffold_35_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(12361..12816)
DNA (456bp) protein (152aa)
50S ribosomal protein L13 n=9 Tax=Bacteroidales RepID=A6LHM5_PARD8
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_068_000M1_scaffold_35_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13012..13644)
DNA (633bp) protein (211aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LHM4_PARD8
hypothetical protein
Outer membrane beta-barrel domain protein {ECO:0000313|EMBL:KDS63617.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_068_000M1_scaffold_35_12
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13977..17186)
DNA (3210bp) protein (1070aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IK07_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50703.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_068_000M1_scaffold_35_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17907..21752
DNA (3846bp) protein (1282aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
DNA polymerase III alpha subunit n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IWA3_9PORP
DNA polymerase III subunit alpha
L3_068_000M1_scaffold_35_14
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21840..22157
DNA (318bp) protein (106aa)
Thioredoxin n=6 Tax=Bacteroidales RepID=A6LHM1_PARD8
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_068_000M1_scaffold_35_15
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22218..22880)
DNA (663bp) protein (221aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=C7X5E6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85095.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_068_000M1_scaffold_35_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22951..25344
DNA (2394bp) protein (798aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZX80_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN20359.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
TonB dependent outer membrane protein
L3_068_000M1_scaffold_35_17
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25477..28125
DNA (2649bp) protein (883aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Parabacteroides RepID=C7X5E4_9PORP
Two-component system sensor histidine kinase {ECO:0000313|EMBL:CDB50708.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
two-component system sensor histidine kinase
L3_068_000M1_scaffold_35_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28120..29127)
DNA (1008bp) protein (336aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Two-component system sensor histidine kinase n=3 Tax=Parabacteroides RepID=A6LHL7_PARD8
two-component system sensor histidine kinase
L3_068_000M1_scaffold_35_19
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29124..30488)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5Z100_9PORP
two-component system response regulator
Putative two-component system response regulator {ECO:0000313|EMBL:CDB50710.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_068_000M1_scaffold_35_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30705..31310
DNA (606bp) protein (202aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A6LHL5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR45179.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_068_000M1_scaffold_35_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31281..32054)
DNA (774bp) protein (258aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZX84_9PORP
NADH pyrophosphatase
Putative NADH pyrophosphatase {ECO:0000313|EMBL:ABR45178.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_068_000M1_scaffold_35_22
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32268..34655
DNA (2388bp) protein (796aa)
Putative ABC transporter permease n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IK21_9PORP
Putative ABC transporter permease {ECO:0000313|EMBL:CDB50713.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
ABC transporter permease
L3_068_000M1_scaffold_35_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34594..38703)
DNA (4110bp) protein (1370aa)
Two-component system sensor histidine kinase/response regulator, hybrid n=2 Tax=Parabacteroides distasonis RepID=A6LHL2_PARD8
two-component system sensor histidine kinase/response regulator
Two-component system sensor histidine kinase/response regulator, hybrid {ECO:0000313|EMBL:ABR45176.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_068_000M1_scaffold_35_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38866..41262
DNA (2397bp) protein (799aa)
Putative TonB-dependent receptor n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LHL1_PARD8
Putative TonB-dependent receptor {ECO:0000313|EMBL:ABR45175.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
TonB-dependent receptor
L3_068_000M1_scaffold_35_25
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41693..42262
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B745_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31911.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
acetyltransferase
L3_068_000M1_scaffold_35_26
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42281..43054
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B7Q5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31910.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
type 11 methyltransferase
L3_068_000M1_scaffold_35_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43117..43269
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6AV72_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS64094.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_068_000M1_scaffold_35_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44198..47152)
DNA (2955bp) protein (985aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZY13_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS64093.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_068_000M1_scaffold_35_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

47945..50671
DNA (2727bp) protein (909aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AFJ8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22325.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
acylaminoacyl-peptidase
L3_068_000M1_scaffold_35_30
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50680..51657)
DNA (978bp) protein (326aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AV67_9PORP
two-component system sensor histidine kinase
Displaying items 1-30 of 105 in total

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