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L3_068_000M1_scaffold_63

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_63_1
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..864
DNA (864bp) protein (288aa)
PF05656 family protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CC69_9CLOT
PF05656 family protein {ECO:0000313|EMBL:CDD74913.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_068_000M1_scaffold_63_2
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

922..3453
DNA (2532bp) protein (844aa)
S-layer domain-containing protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CB10_9CLOT
S-layer domain-containing protein {ECO:0000313|EMBL:CDD74912.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
S-layer domain-containing protein
L3_068_000M1_scaffold_63_3
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3488..4402
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9Y0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74911.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_068_000M1_scaffold_63_4
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4472..5242
DNA (771bp) protein (257aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAD3_9CLOT
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:CDD74910.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
L3_068_000M1_scaffold_63_5
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5318..5947
DNA (630bp) protein (210aa)
Peptidase S14 ClpP n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9R9_9CLOT
Peptidase S14 ClpP {ECO:0000313|EMBL:CDD74909.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
peptidase S14 ClpP
L3_068_000M1_scaffold_63_6
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6065..8635
DNA (2571bp) protein (857aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5VK68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ91073.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
DNA translocase FtsK
L3_068_000M1_scaffold_63_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8635..9498
DNA (864bp) protein (288aa)
Alpha-L-glutamate ligase RimK family n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9X6_9CLOT
Alpha-L-glutamate ligase RimK family {ECO:0000313|EMBL:CDD74906.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
alpha-L-glutamate ligase
L3_068_000M1_scaffold_63_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9495..10334
DNA (840bp) protein (280aa)
RimK domain protein ATP-grasp n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAC8_9CLOT
RimK domain protein ATP-grasp {ECO:0000313|EMBL:CDD74905.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
RimK domain-containing protein ATP-grasp
L3_068_000M1_scaffold_63_9
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10402..12072
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9R5_9CLOT
L3_068_000M1_scaffold_63_10
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12069..12953)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CC59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74903.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
helix-turn-helix domain-containing protein
L3_068_000M1_scaffold_63_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13120..18270
DNA (5151bp) protein (1717aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34806.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L3_068_000M1_scaffold_63_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18356..18958
DNA (603bp) protein (201aa)
Protein involved in cell division n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAX5_9CLOT
Protein involved in cell division {ECO:0000313|EMBL:CDD74872.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Protein involved in cell division
L3_068_000M1_scaffold_63_13
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19137..19565)
DNA (429bp) protein (143aa)
Aspartate transcarbamylase regulatory subunit n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9U9_9CLOT
Aspartate transcarbamylase regulatory subunit {ECO:0000313|EMBL:CDD74871.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
aspartate carbamoyltransferase
L3_068_000M1_scaffold_63_14
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19559..20482)
DNA (924bp) protein (308aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAA3_9CLOT
L3_068_000M1_scaffold_63_15
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20672..22957
DNA (2286bp) protein (762aa)
Aconitate hydratase domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9N3_9CLOT
Aconitate hydratase domain protein {ECO:0000313|EMBL:CDD74869.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_068_000M1_scaffold_63_16
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22977..23243
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CC30_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74868.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_068_000M1_scaffold_63_17
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23437..23631)
DNA (195bp) protein (65aa)
Ferredoxin n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAX1_9CLOT
Ferredoxin {ECO:0000313|EMBL:CDD74867.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
ferredoxin
L3_068_000M1_scaffold_63_18
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23772..24452
DNA (681bp) protein (227aa)
RelA/SpoT domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9U7_9CLOT
RelA/SpoT domain protein {ECO:0000313|EMBL:CDD74866.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_068_000M1_scaffold_63_19
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24468..25307
DNA (840bp) protein (280aa)
5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAA0_9CLOT
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_068_000M1_scaffold_63_20
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25304..26641
DNA (1338bp) protein (446aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
SSU ribosomal protein S12P methylthiotransferase (EC:1.3.1.74 2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9M9_9CLOT
L3_068_000M1_scaffold_63_21
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26642..27187
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CC26_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74863.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
L3_068_000M1_scaffold_63_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27187..27669
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74862.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
competence/damage-inducible protein CinA C-terminal domain
L3_068_000M1_scaffold_63_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27675..28157
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9U1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74861.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_068_000M1_scaffold_63_24
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28175..29416
DNA (1242bp) protein (414aa)
Flavoprotein family protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA96_9CLOT
Flavoprotein family protein {ECO:0000313|EMBL:CDD74860.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
conserved hypothetical protein TIGR00275
L3_068_000M1_scaffold_63_25
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29432..30100
DNA (669bp) protein (223aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9M3_9CLOT
L3_068_000M1_scaffold_63_26
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30090..30962
DNA (873bp) protein (291aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CC21_9CLOT
L3_068_000M1_scaffold_63_27
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30932..32029
DNA (1098bp) protein (366aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAW5_9CLOT
4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein {ECO:0000313|EMBL:CDD74857.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain containing protein
L3_068_000M1_scaffold_63_28
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32029..32811
DNA (783bp) protein (261aa)
chemotaxis protein CheR (EC:2.1.1.80)
MCP methyltransferase CheR-type n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9T6_9CLOT
MCP methyltransferase CheR-type {ECO:0000313|EMBL:CDD74856.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_068_000M1_scaffold_63_29
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32902..33906
DNA (1005bp) protein (335aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Phosphate acyltransferase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA92_9CLOT
phosphate:acyl-[acyl carrier protein] acyltransferase
L3_068_000M1_scaffold_63_30
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33922..34620
DNA (699bp) protein (233aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9L8_9CLOT
Displaying items 1-30 of 127 in total

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