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L3_068_000M1_scaffold_77

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_77_1
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..251
DNA (249bp) protein (83aa)
Stage V sporulation protein AD n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1I7_9CLOT
Stage V sporulation protein AD {ECO:0000313|EMBL:CDB51566.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
stage V sporulation protein AD
L3_068_000M1_scaffold_77_2
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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254..403
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNF1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51567.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_068_000M1_scaffold_77_3
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(473..1066)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IMM3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51568.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_068_000M1_scaffold_77_4
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1056..2006)
DNA (951bp) protein (317aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Pseudouridine synthase RluA family n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QP07_9FIRM
L3_068_000M1_scaffold_77_5
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2221..4194
DNA (1974bp) protein (658aa)
UvrABC system protein B n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1J0_9CLOT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
uvrB; UvrABC system protein B
L3_068_000M1_scaffold_77_6
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4191..7019
DNA (2829bp) protein (943aa)
UvrABC system protein A n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNF6_9CLOT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
uvrA; UvrABC system protein A
L3_068_000M1_scaffold_77_7
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7071..7541)
DNA (471bp) protein (157aa)
NUDIX hydrolase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IMM6_9CLOT
NUDIX hydrolase {ECO:0000313|EMBL:CDB51573.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
NUDIX hydrolase
L3_068_000M1_scaffold_77_8
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7708..8502
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IYR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51574.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_068_000M1_scaffold_77_9
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8519..9103
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IQQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51575.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_068_000M1_scaffold_77_10
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9326..10093
DNA (768bp) protein (256aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1J3_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
sigG; RNA polymerase sigma-G factor
L3_068_000M1_scaffold_77_11
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10138..10344)
DNA (207bp) protein (69aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNF8_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDB51577.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
putative Xre family DNA-binding protein
L3_068_000M1_scaffold_77_12
unknown

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10520..10969
DNA (450bp) protein (150aa)

This feature has no annotations

L3_068_000M1_scaffold_77_13
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10987..13425
DNA (2439bp) protein (813aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JP17_9CLOT
Ig-like domain-containing surface protein {ECO:0000313|EMBL:CDE42504.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
Fibronectin type III domain./Regulator of chromosome condensation (RCC1) repeat.
L3_068_000M1_scaffold_77_14
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13781..13945
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51757.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_068_000M1_scaffold_77_15
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14179..16233
DNA (2055bp) protein (685aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Putative translation elongation factor G n=1 Tax=Clostridium sp. CAG:217 RepID=R6IN43_9CLOT
Putative translation elongation factor G {ECO:0000313|EMBL:CDB51758.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_068_000M1_scaffold_77_16
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16407..17018
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZ80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51759.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_068_000M1_scaffold_77_17
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17119..17598
DNA (480bp) protein (160aa)
Transcriptional regulator MarR family n=1 Tax=Clostridium sp. CAG:217 RepID=R6IR67_9CLOT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDB51760.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Transcriptional regulators
L3_068_000M1_scaffold_77_18
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17839..18057
DNA (219bp) protein (73aa)
Heavy metal-associated domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J220_9CLOT
Heavy metal-associated domain protein {ECO:0000313|EMBL:CDB51761.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Heavy-metal-associated domain.
L3_068_000M1_scaffold_77_19
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18081..19955
DNA (1875bp) protein (625aa)
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Cadmium-exporting ATPase n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNT2_9CLOT
Cadmium-exporting ATPase {ECO:0000313|EMBL:CDB51762.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_068_000M1_scaffold_77_20
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20112..20909
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IN48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51763.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Transcriptional regulator, AraC family
L3_068_000M1_scaffold_77_21
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21006..22373
DNA (1368bp) protein (456aa)
Metallophosphoesterase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZ85_9CLOT
Metallophosphoesterase {ECO:0000313|EMBL:CDB51764.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
5'-nucleotidase domain-containing protein
L3_068_000M1_scaffold_77_22
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22410..23852
DNA (1443bp) protein (481aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Clostridium sp. CAG:217 RepID=R6IR72_9CLOT
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CDB51765.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
gph; sugar (Glycoside-Pentoside-Hexuronide) transporter domain protein
L3_068_000M1_scaffold_77_23
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23915..25312)
DNA (1398bp) protein (466aa)
Putative efflux protein MATE family n=1 Tax=Clostridium sp. CAG:217 RepID=R6J224_9CLOT
Putative efflux protein MATE family {ECO:0000313|EMBL:CDB51766.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
putative efflux protein, MATE family
L3_068_000M1_scaffold_77_24
unknown

Not on your lists

comp(25423..25620)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_068_000M1_scaffold_77_25
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25821..28907
DNA (3087bp) protein (1029aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Glycoside hydrolase family 42 domain 5 loop region n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNT6_9CLOT
glycoside hydrolase family 42 protein
L3_068_000M1_scaffold_77_26
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28907..30586
DNA (1680bp) protein (560aa)
Alpha-galactosidase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IN52_9CLOT
Alpha-galactosidase {ECO:0000313|EMBL:CDB51768.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
alpha-galactosidase
L3_068_000M1_scaffold_77_27
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30804..32471)
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZ92_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51769.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_068_000M1_scaffold_77_28
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32674..32967)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IR77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51770.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_068_000M1_scaffold_77_29
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32986..33228)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J230_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51771.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_068_000M1_scaffold_77_30
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(33344..35743)
DNA (2400bp) protein (800aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNU1_9CLOT
Displaying items 1-30 of 110 in total

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