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L3_068_000M1_scaffold_107

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_107_1
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

181..1062
DNA (882bp) protein (294aa)
Xylanase n=9 Tax=Bacteroidales RepID=A6L8Y2_PARD8
xylanase
Uncharacterized protein {ECO:0000313|EMBL:EEU50773.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_068_000M1_scaffold_107_2
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1269..3581
DNA (2313bp) protein (771aa)
Periplasmic beta-glucosidase n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6ISX3_9PORP
Periplasmic beta-glucosidase {ECO:0000313|EMBL:CDB48486.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
beta-glucosidase
L3_068_000M1_scaffold_107_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4106..4927)
DNA (822bp) protein (274aa)
Peptidase, M23 family n=2 Tax=Parabacteroides RepID=E1YYG6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27798.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
metalloendopeptidase
L3_068_000M1_scaffold_107_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5351..5653
DNA (303bp) protein (101aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6L8Y6_PARD8
hypothetical protein
Helix-turn-helix family protein {ECO:0000313|EMBL:KDS73210.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_068_000M1_scaffold_107_5
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5903..6898
DNA (996bp) protein (332aa)
TRAP-type C4-dicarboxylate transport system periplasmic component n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IT08_9PORP
TRAP-type C4-dicarboxylate transport system periplasmic component {ECO:0000313|EMBL:CDB48501.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
TRAP-type C4-dicarboxylate transport system periplasmic protein
L3_068_000M1_scaffold_107_6
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6882..7352
DNA (471bp) protein (157aa)
TRAP transporter, DctQ-like membrane protein n=2 Tax=Bacteroidales RepID=C7X965_9PORP
Aspartate kinase, monofunctional class {ECO:0000313|EMBL:EFI07136.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
TRAP-type C4-dicarboxylate transport system small permease
L3_068_000M1_scaffold_107_7
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7365..8663
DNA (1299bp) protein (433aa)
TRAP transporter, DctM subunit n=2 Tax=Bacteroidales RepID=D0TA77_9BACE
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EEY84140.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_068_000M1_scaffold_107_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8842..10020)
DNA (1179bp) protein (393aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=4 Tax=Bacteroidales RepID=C7X967_9PORP
L3_068_000M1_scaffold_107_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10103..10915)
DNA (813bp) protein (271aa)
D-mannonate oxidoreductase (EC:1.1.1.131)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=4 Tax=Parabacteroides RepID=C7X968_9PORP
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEU50795.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_068_000M1_scaffold_107_10
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10915..11976)
DNA (1062bp) protein (354aa)
Transcriptional regulator, LacI family n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TA80_9BACE
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEY84143.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
transcriptional regulator catabolite control protein A
L3_068_000M1_scaffold_107_11
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12011..12637)
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6ATK3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN26925.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_068_000M1_scaffold_107_12
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12939..14150
DNA (1212bp) protein (404aa)
Multidrug resistance protein AcrA/AcrE family n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IE28_9PORP
Multidrug resistance protein AcrA/AcrE family {ECO:0000313|EMBL:CDB48508.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
AcrA/AcrE family multidrug resistance protein
L3_068_000M1_scaffold_107_13
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14204..17425
DNA (3222bp) protein (1074aa)
AcrB/AcrD family multidrug resistance protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IPY5_9PORP
AcrB/AcrD family multidrug resistance protein {ECO:0000313|EMBL:CDB48509.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
AcrB/AcrD family multidrug resistance protein
L3_068_000M1_scaffold_107_14
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17429..18820
DNA (1392bp) protein (464aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=4 Tax=Parabacteroides RepID=C7X973_9PORP
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EFK61510.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
outer membrane protein oprM
L3_068_000M1_scaffold_107_15
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18844..19611
DNA (768bp) protein (256aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Putative acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TA85_9BACE
UDP-N-acetylglucosamine acetyltransferase
L3_068_000M1_scaffold_107_16
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19796..20257
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JEE1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB48512.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_068_000M1_scaffold_107_17
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20528..21469)
DNA (942bp) protein (314aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Malate dehydrogenase n=7 Tax=Bacteroidales RepID=MDH_PARD8
malate dehydrogenase
L3_068_000M1_scaffold_107_18
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21742..24519
DNA (2778bp) protein (926aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Parabacteroides sp. D13 RepID=C7X977_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEU50804.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_068_000M1_scaffold_107_19
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24532..26157
DNA (1626bp) protein (542aa)
SusD family protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TA89_9BACE
SusD family protein {ECO:0000313|EMBL:EEY84152.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_068_000M1_scaffold_107_20
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26209..27393)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AKC3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN26936.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_068_000M1_scaffold_107_21
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27394..27975)
DNA (582bp) protein (194aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6L907_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB48517.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_068_000M1_scaffold_107_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27972..28520)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=A6L908_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR42172.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_068_000M1_scaffold_107_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28703..30187
DNA (1485bp) protein (495aa)
Ferredoxin-type protein n=2 Tax=Bacteroidales RepID=D7IW36_9BACE
ferredoxin-type protein
Ferredoxin-type protein {ECO:0000313|EMBL:EFI07153.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_068_000M1_scaffold_107_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30210..31604
DNA (1395bp) protein (465aa)
Aldo/keto reductase n=3 Tax=Bacteroidales RepID=A6L910_PARD8
aldo/keto reductase
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:KDS73186.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_068_000M1_scaffold_107_25
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31773..33158
DNA (1386bp) protein (462aa)
Aldo/keto reductase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IW38_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ87560.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
aldo/keto reductase
L3_068_000M1_scaffold_107_26
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33180..34700
DNA (1521bp) protein (507aa)
Ferredoxin-type protein n=2 Tax=Bacteroidales RepID=D7IW39_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ87561.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
ferredoxin-type protein
L3_068_000M1_scaffold_107_27
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34857..37382
DNA (2526bp) protein (842aa)
Stage III sporulation protein E n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IW40_9BACE
Stage III sporulation protein E {ECO:0000313|EMBL:EFI07157.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
FtsK/SpoIIIE family cell division protein
L3_068_000M1_scaffold_107_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37385..38059
DNA (675bp) protein (225aa)
Outer membrane lipoprotein carrier protein LolA n=4 Tax=Bacteroidales RepID=C7X985_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27823.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_068_000M1_scaffold_107_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38097..39050
DNA (954bp) protein (318aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Thioredoxin reductase n=3 Tax=Parabacteroides RepID=E1YYE0_9PORP
thioredoxin reductase
L3_068_000M1_scaffold_107_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39162..39938
DNA (777bp) protein (259aa)
Glycerophosphodiester phosphodiesterase family protein n=2 Tax=Parabacteroides RepID=C7X987_9PORP
Glycerophosphoryl diester phosphodiesterase family protein {ECO:0000313|EMBL:KDS44824.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
glycerophosphodiester phosphodiesterase
Displaying items 1-30 of 92 in total

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