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L3_068_000M1_scaffold_202

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_202_1
unknown

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1..288
DNA (288bp) protein (96aa)

This feature has no annotations

L3_068_000M1_scaffold_202_2
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(377..997)
DNA (621bp) protein (207aa)
Galactoside O-acetyltransferase {ECO:0000313|EMBL:KHJ39621.1}; EC=2.3.1.18 {ECO:0000313|EMBL:KHJ39621.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
acetyltransferase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B6EB98
acetyltransferase
L3_068_000M1_scaffold_202_3
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1012..2088)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VCR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY60926.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
Coenzyme F420-reducing hydrogenase, beta subunit
L3_068_000M1_scaffold_202_4
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2111..3625)
DNA (1515bp) protein (505aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCR1_9CLOT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDO58658.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L3_068_000M1_scaffold_202_5
Fibrobacter succinogenes, Fibrobacter, Fibrobacterales, Fibrobacteria, Fibrobacteres, Bacteria

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comp(3775..4122)
DNA (348bp) protein (116aa)
Acyltransferase family protein n=1 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=D9S8L3_FIBSS
acyltransferase family protein
Acyltransferase family protein {ECO:0000313|EMBL:ADL26314.1}; TaxID=59374 species="Bacteria; Fibrobacteres; Fibrobacterales; Fibrobacteraceae; Fibrobacter.;" source="Fibrobacter succinogenes (strain ATCC 19169 / S85).;"
L3_068_000M1_scaffold_202_6
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4112..5290)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K748_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY60924.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
Polysaccharide pyruvyl transferase
L3_068_000M1_scaffold_202_7
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5306..6466)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5KIX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY60922.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
putative polysaccharide polymerase protein
L3_068_000M1_scaffold_202_8
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6463..7578)
DNA (1116bp) protein (372aa)
Glycosyltransferase group 1 family protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K2L1_9CLOT
Glycosyltransferase group 1 family protein {ECO:0000313|EMBL:CCY60923.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
glycosyltransferase
L3_068_000M1_scaffold_202_9
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7578..8483)
DNA (906bp) protein (302aa)
Glycosyl transferase family 2 n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CSD6_PAESJ
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACS99088.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
L3_068_000M1_scaffold_202_10
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8499..9713)
DNA (1215bp) protein (405aa)
F420H2:quinone oxidoreductase n=1 Tax=Bacteroides sp. D22 RepID=D7J2I4_9BACE
F420H2:quinone oxidoreductase {ECO:0000313|EMBL:EFI14338.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
coenzyme F420-reducing hydrogenase subunit beta
L3_068_000M1_scaffold_202_11
Clostridium sp. CAG:793, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9715..10905)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:793 RepID=R5N5Z5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY99430.1}; TaxID=1262840 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:793.;"
Polysaccharide pyruvyl transferase
L3_068_000M1_scaffold_202_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10916..12013)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N883_9FIRM
glycosyl transferases group 1 family protein
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:AIY83574.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_068_000M1_scaffold_202_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12010..13074)
DNA (1065bp) protein (355aa)
Glycosyltransferase n=1 Tax=Clostridium nexile CAG:348 RepID=R6QSS9_9CLOT
Glycosyltransferase {ECO:0000313|EMBL:CDC24987.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Glycosyltransferase
L3_068_000M1_scaffold_202_14
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13127..13924)
DNA (798bp) protein (266aa)
Putative glycosyltransferase n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEL0_ACEWD
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AFA48113.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_068_000M1_scaffold_202_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13960..15231)
DNA (1272bp) protein (424aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CBL26456.1}; EC=1.1.1.22 {ECO:0000313|EMBL:CBL26456.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Nucleotide sugar dehydrogenase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5E4_9FIRM
L3_068_000M1_scaffold_202_16
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15298..16746)
DNA (1449bp) protein (483aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TGU7_9FIRM
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CDC71475.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_068_000M1_scaffold_202_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17034..18569)
DNA (1536bp) protein (512aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases {ECO:0000313|EMBL:CBK90013.1}; EC=1.3.99.22 {ECO:0000313|EMBL:CBK90013.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3M3_9FIRM
L3_068_000M1_scaffold_202_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18566..19195)
DNA (630bp) protein (210aa)
Zn-dependent hydrolases, including glyoxylases n=1 Tax=Eubacterium rectale M104/1 RepID=D4JHP6_9FIRM
Zn-dependent hydrolases, including glyoxylases
Zn-dependent hydrolases, including glyoxylases {ECO:0000313|EMBL:CBK93143.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_068_000M1_scaffold_202_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19251..21602)
DNA (2352bp) protein (784aa)
(P)ppGpp synthetase I, SpoT/RelA n=2 Tax=Eubacterium RepID=C4ZI23_EUBR3
(p)ppGpp synthetase I, SpoT/RelA
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ACR76660.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_068_000M1_scaffold_202_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21678..22622)
DNA (945bp) protein (315aa)
Transcriptional regulator/sugar kinase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZI24_EUBR3
transcriptional regulator/sugar kinase
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:ACR76661.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_068_000M1_scaffold_202_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22681..23592)
DNA (912bp) protein (304aa)
Acetyltransferases, including N-acetylases of ribosomal proteins n=1 Tax=Eubacterium rectale M104/1 RepID=D4JHP8_9FIRM
Acetyltransferases, including N-acetylases of ribosomal proteins
Acetyltransferases, including N-acetylases of ribosomal proteins {ECO:0000313|EMBL:CBK93145.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_068_000M1_scaffold_202_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23592..24113)
DNA (522bp) protein (174aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Eubacterium RepID=C4ZI27_EUBR3
L3_068_000M1_scaffold_202_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24219..25613)
DNA (1395bp) protein (465aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZI28_EUBR3
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
L3_068_000M1_scaffold_202_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25615..26670)
DNA (1056bp) protein (352aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
D-alanine--D-alanine ligase n=2 Tax=Eubacterium rectale RepID=C4ZI29_EUBR3
L3_068_000M1_scaffold_202_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26843..27118)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JHQ2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93149.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_068_000M1_scaffold_202_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27539..28066)
DNA (528bp) protein (176aa)
Ribosome-associated protein Y (PSrp-1) n=4 Tax=Eubacterium RepID=C4ZI34_EUBR3
SSU ribosomal protein S30P/sigma 54 modulation protein
SSU ribosomal protein S30P/sigma 54 modulation protein {ECO:0000313|EMBL:CBK93150.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_068_000M1_scaffold_202_27
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28274..30337)
DNA (2064bp) protein (688aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TDR2_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CDC71533.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_068_000M1_scaffold_202_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30368..31672)
DNA (1305bp) protein (435aa)
Predicted ATPase (AAA+ superfamily) n=1 Tax=Eubacterium rectale M104/1 RepID=D4JHQ5_9FIRM
Predicted ATPase (AAA+ superfamily)
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CBK93152.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_068_000M1_scaffold_202_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31791..33113)
DNA (1323bp) protein (441aa)
Signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK93153.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Signal transduction histidine kinase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JHQ6_9FIRM
L3_068_000M1_scaffold_202_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33159..33827)
DNA (669bp) protein (223aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3L1_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBK90001.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Displaying items 1-30 of 86 in total

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