name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_068_000M1_scaffold_211_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(110..1609)
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Tat pathway signal sequence domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPC8_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFB75390.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L3_068_000M1_scaffold_211_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1599..2729)
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dTDP-4-amino-4,6-dideoxy-D-glucose transaminase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPC9_9FIRM
dTDP-4-amino-4,6-dideoxy-D-glucose transaminase {ECO:0000313|EMBL:EFB75391.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
TDP-4-oxo-6-deoxy-D-glucose transaminase
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L3_068_000M1_scaffold_211_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2833..3327)
|
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75392.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L3_068_000M1_scaffold_211_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
3584..4750
|
Aminotransferase, class I/II {ECO:0000313|EMBL:EFB75393.1}; EC=2.6.1.- {ECO:0000313|EMBL:EFB75393.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Aminotransferase, class I/II n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPD1_9FIRM
Aspartate/tyrosine/aromatic aminotransferase
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L3_068_000M1_scaffold_211_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(5011..5379)
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Transcriptional regulator, BlaI/MecI/CopY family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPD2_9FIRM
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EFB75394.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Penicillinase repressor.
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L3_068_000M1_scaffold_211_6 |
Not on your lists |
comp(5691..6380)
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RNA polymerase, sigma 28 subunit, SigK n=1 Tax=human gut metagenome RepID=K1VBW0_9ZZZZ
RNA polymerase, sigma 28 subunit, SigK {ECO:0000313|EMBL:EKC81456.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
RNA polymerase sigma 28 subunit SigK
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L3_068_000M1_scaffold_211_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(6551..7513)
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K+-dependent Na+/Ca+ exchanger related-protein n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAX6_9FIRM
K+-dependent Na+/Ca+ exchanger related-protein
K+-dependent Na+/Ca+ exchanger family protein {ECO:0000313|EMBL:EDP22062.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
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L3_068_000M1_scaffold_211_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
8135..8569
|
Transcriptional regulator, AsnC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ00_9FIRM
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EFB75192.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Transcriptional regulators
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L3_068_000M1_scaffold_211_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
8581..9015
|
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75193.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L3_068_000M1_scaffold_211_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
9025..10014
|
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB75194.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB75194.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ02_9FIRM
Predicted glycosyltransferases
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L3_068_000M1_scaffold_211_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(10451..12523)
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translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Putative translation elongation factor G n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PR61_9FIRM
Putative translation elongation factor G {ECO:0000313|EMBL:EFB74908.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L3_068_000M1_scaffold_211_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(12967..14223)
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Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PR95_9FIRM
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EFB74797.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
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L3_068_000M1_scaffold_211_13
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(14352..15164)
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hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B328EE
Prepilin-type cleavage/methylation protein {ECO:0000313|EMBL:ERI66381.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
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L3_068_000M1_scaffold_211_14
unknown
|
Not on your lists |
comp(15161..15547)
|
This feature has no annotations |
|
L3_068_000M1_scaffold_211_15
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(15554..16384)
|
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WLM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77958.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
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L3_068_000M1_scaffold_211_16
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(16412..27148)
|
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SGQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC54561.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
|
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L3_068_000M1_scaffold_211_17
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
27435..27914
|
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6TJP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC58962.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
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L3_068_000M1_scaffold_211_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
27901..28692
|
Type IV prepilin peptidase n=1 Tax=Clostridium sp. D5 RepID=F0YWU3_9CLOT
Type IV prepilin peptidase {ECO:0000313|EMBL:EGB93431.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
prepilin peptidase
|
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L3_068_000M1_scaffold_211_19
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
28891..30102
|
Bacterial type II secretion system domain protein F n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MCL0_9FIRM
Bacterial type II secretion system domain protein F {ECO:0000313|EMBL:EDR97680.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
putative type II secretion pathway protein XcpS
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L3_068_000M1_scaffold_211_20
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
30301..31194
|
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CGA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66376.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
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L3_068_000M1_scaffold_211_21
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
31233..31802
|
Uncharacterized protein n=2 Tax=Dorea RepID=R6SG65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC58955.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
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L3_068_000M1_scaffold_211_22
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
31814..32587
|
Uncharacterized protein n=2 Tax=Dorea RepID=R6TJN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC58952.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
|
|
L3_068_000M1_scaffold_211_23
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
32584..34272
|
Type II/IV secretion system protein n=2 Tax=Anaerostipes RepID=B0MCL3_9FIRM
Type II/IV secretion system protein {ECO:0000313|EMBL:CDC35095.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
type IV pilus assembly protein PilB
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L3_068_000M1_scaffold_211_24
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
34503..35552
|
Twitching motility protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KGD6_9FIRM
Twitching motility protein {ECO:0000313|EMBL:EGN34205.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
pilT; pili retraction protein PilT
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L3_068_000M1_scaffold_211_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(35781..36224)
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Toxin secretion/phage lysis holin n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLA8_9FIRM
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:EFB76766.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative holin
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L3_068_000M1_scaffold_211_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(36224..36847)
|
Peptidase, M23 family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRE6_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:EFB74672.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L3_068_000M1_scaffold_211_27
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(36850..38301)
|
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KP99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48183.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
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L3_068_000M1_scaffold_211_28
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(38321..39907)
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Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AT52_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03812.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
hypothetical protein
|
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L3_068_000M1_scaffold_211_29
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(40033..40380)
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Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RKB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC49333.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
|
|
L3_068_000M1_scaffold_211_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(40384..41805)
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Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74807.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Phage tape measure
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