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L3_068_000M1_scaffold_226

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_226_1
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

182..349
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CC72_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74918.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_068_000M1_scaffold_226_2
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


492..1511
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9S7_9CLOT
phenylalanyl-tRNA synthetase subunit alpha
L3_068_000M1_scaffold_226_3
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1524..3962
DNA (2439bp) protein (813aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAE4_9CLOT
L3_068_000M1_scaffold_226_4
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3996..4481
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9Y7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74921.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
VanZ family protein
L3_068_000M1_scaffold_226_5
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4495..4824
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=root RepID=R7CB18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74922.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_068_000M1_scaffold_226_6
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4808..5602)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CC79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74923.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_068_000M1_scaffold_226_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5745..6389
DNA (645bp) protein (215aa)
Cell wall hydrolase SleB n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9T1_9CLOT
Cell wall hydrolase SleB {ECO:0000313|EMBL:CDD74924.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Cell Wall Hydrolase.
L3_068_000M1_scaffold_226_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6489..7973
DNA (1485bp) protein (495aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAE8_9CLOT
Threonine synthase {ECO:0000313|EMBL:CDD74925.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_068_000M1_scaffold_226_9
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7989..8762
DNA (774bp) protein (258aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-((5'-phosphoribosylamino)m ethylideneamino)imidazole-4-carboxamide isomerase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9Z2_9CLOT
1-(5-phosphoribosyl)-5-((5'-phosphoribosylamino)m ethylideneamino)imidazole-4-carboxamide isomerase {ECO:0000313|EMBL:CDD74926.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_068_000M1_scaffold_226_10
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8947..9435
DNA (489bp) protein (163aa)
Cell Wall Hydrolase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CB23_9CLOT
Cell Wall Hydrolase {ECO:0000313|EMBL:CDD74927.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
cell wall hydrolase SleB
L3_068_000M1_scaffold_226_11
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9500..11170
DNA (1671bp) protein (557aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Glutamine--tRNA ligase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CC84_9CLOT
glutaminyl-tRNA synthetase
L3_068_000M1_scaffold_226_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11197..12042
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9T7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74929.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_068_000M1_scaffold_226_13
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12043..12762)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74930.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_068_000M1_scaffold_226_14
Capnocytophaga sp. oral taxon 326, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12821..13417
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 326 str. F0382 RepID=L1PU62_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKY19243.1}; TaxID=1035193 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 326 str. F0382.;"
hypothetical protein
L3_068_000M1_scaffold_226_15
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13615..14028
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2D4C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI91168.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Protein of unknown function (DUF2992).
L3_068_000M1_scaffold_226_16
unknown

Not on your lists

14173..15288
DNA (1116bp) protein (372aa)

This feature has no annotations

L3_068_000M1_scaffold_226_17
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

15701..15868
DNA (168bp) protein (56aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y818_9FIRM
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CDD30055.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L3_068_000M1_scaffold_226_18
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16154..16483
DNA (330bp) protein (110aa)
Nicotinamide mononucleotide transporter PnuC n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AQE1_9CLOT
Nicotinamide mononucleotide transporter {ECO:0000313|EMBL:EXM39971.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
nicotinamide mononucleotide transporter PnuC
L3_068_000M1_scaffold_226_19
unknown

Not on your lists

17426..18013
DNA (588bp) protein (196aa)

This feature has no annotations

L3_068_000M1_scaffold_226_20
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19536..20135
DNA (600bp) protein (200aa)
Predicted membrane protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA00_9CLOT
Predicted membrane protein {ECO:0000313|EMBL:CDD74936.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Predicted membrane protein
L3_068_000M1_scaffold_226_21
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20191..20937
DNA (747bp) protein (249aa)
Hypothetical methyltransferase n=1 Tax=Clostridium sp. CAG:632 RepID=R5JXF7_9CLOT
Hypothetical methyltransferase {ECO:0000313|EMBL:CCY59100.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
methyltransferase
L3_068_000M1_scaffold_226_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21393..21992
DNA (600bp) protein (200aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:62 RepID=R7CC94_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDD74938.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Transcriptional regulator
L3_068_000M1_scaffold_226_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21992..24418
DNA (2427bp) protein (809aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9U6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74939.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_068_000M1_scaffold_226_24
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24561..24845
DNA (285bp) protein (95aa)
10 kDa chaperonin n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAG2_9CLOT
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Co-chaperonin GroES (HSP10)
L3_068_000M1_scaffold_226_25
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24874..26499
DNA (1626bp) protein (542aa)
60 kDa chaperonin n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA04_9CLOT
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
molecular chaperone GroEL
L3_068_000M1_scaffold_226_26
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26526..27041
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CB39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74942.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_068_000M1_scaffold_226_27
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27212..29254
DNA (2043bp) protein (681aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CC97_9CLOT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDD74943.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Methyl-accepting chemotaxis protein
L3_068_000M1_scaffold_226_28
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29358..30815
DNA (1458bp) protein (486aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.37)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9V0_9CLOT
L3_068_000M1_scaffold_226_29
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30769..31506
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74945.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
N-acetylmuramoyl-L-alanine amidase
L3_068_000M1_scaffold_226_30
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31530..32012)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74946.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
Displaying items 1-30 of 116 in total

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