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L3_068_000M1_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_244_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..125
DNA (123bp) protein (41aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GMD0_CLOSY
dipeptidase E
Uncharacterized protein {ECO:0000313|EMBL:EGA94056.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_068_000M1_scaffold_244_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(218..829)
DNA (612bp) protein (204aa)
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108, ECO:0000313|EMBL:CBL00563.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Isocitrate dehydrogenase [NADP] n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6V0_9FIRM
L3_068_000M1_scaffold_244_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(826..1317)
DNA (492bp) protein (164aa)
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Isocitrate dehydrogenase [NADP] n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6V0_9FIRM
L3_068_000M1_scaffold_244_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1378..2565)
DNA (1188bp) protein (396aa)
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.1)
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:CBL00562.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CBL00562.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6U9_9FIRM
L3_068_000M1_scaffold_244_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2797..3981)
DNA (1185bp) protein (395aa)
Cation diffusion facilitator family transporter n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6U8_9FIRM
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CBL00561.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_068_000M1_scaffold_244_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4213..5409)
DNA (1197bp) protein (399aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SEV0_9FIRM
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EDP19783.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Na+/H+-dicarboxylate symporters
L3_068_000M1_scaffold_244_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5460..6773)
DNA (1314bp) protein (438aa)
UPF0597 protein FPR_00940 n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6U6_9FIRM
hypothetical protein
UPF0597 protein FPR_00940 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_068_000M1_scaffold_244_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6823..7092)
DNA (270bp) protein (90aa)
Endoribonuclease L-PSP n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6U5_9FIRM
endoribonuclease L-PSP
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EDP19781.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_068_000M1_scaffold_244_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7182..8588)
DNA (1407bp) protein (469aa)
Uncharacterized FAD-dependent dehydrogenases n=2 Tax=Faecalibacterium prausnitzii RepID=D4K991_9FIRM
Uncharacterized FAD-dependent dehydrogenases
FAD dependent oxidoreductase {ECO:0000313|EMBL:EDP22960.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_068_000M1_scaffold_244_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8626..9330)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6P6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22959.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_068_000M1_scaffold_244_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9377..10762)
DNA (1386bp) protein (462aa)
MATE efflux family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6P5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDP22958.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
MATE efflux family protein
L3_068_000M1_scaffold_244_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10846..11448)
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6P4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01402.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_068_000M1_scaffold_244_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11487..12866)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6P3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01401.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_068_000M1_scaffold_244_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12898..13737)
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K987_9FIRM
Protein of unknown function, DUF624.
Uncharacterized protein {ECO:0000313|EMBL:CBL01400.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_068_000M1_scaffold_244_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13956..14684
DNA (729bp) protein (243aa)
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267, ECO:0000313|EMBL:CBL01399.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K986_9FIRM
L3_068_000M1_scaffold_244_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14880..15632
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22952.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_068_000M1_scaffold_244_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15635..15805
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6N8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01397.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_068_000M1_scaffold_244_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16204..17274
DNA (1071bp) protein (357aa)
Prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase {ECO:0000313|EMBL:CBL01396.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CBL01396.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Prephenate dehydratase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K983_9FIRM
L3_068_000M1_scaffold_244_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17271..18314
DNA (1044bp) protein (348aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
3-dehydroquinate synthase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K982_9FIRM
L3_068_000M1_scaffold_244_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18318..19460
DNA (1143bp) protein (381aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6N4_9FIRM
L3_068_000M1_scaffold_244_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19462..20724
DNA (1263bp) protein (421aa)
Shikimate kinase {ECO:0000313|EMBL:EDP22946.1}; EC=2.7.1.71 {ECO:0000313|EMBL:EDP22946.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Shikimate kinase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6N3_9FIRM
Shikimate 5-dehydrogenase
L3_068_000M1_scaffold_244_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20705..21169
DNA (465bp) protein (155aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
3-dehydroquinate dehydratase II (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6N2_9FIRM
L3_068_000M1_scaffold_244_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21198..22214
DNA (1017bp) protein (339aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase {ECO:0000313|EMBL:CBL01391.1}; EC=2.5.1.54 {ECO:0000313|EMBL:CBL01391.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K978_9FIRM
L3_068_000M1_scaffold_244_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22307..23581
DNA (1275bp) protein (425aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K977_9FIRM
L3_068_000M1_scaffold_244_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23574..24437
DNA (864bp) protein (288aa)
Prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase {ECO:0000313|EMBL:CBL01389.1}; EC=1.3.1.12 {ECO:0000313|EMBL:CBL01389.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Prephenate dehydrogenase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K976_9FIRM
L3_068_000M1_scaffold_244_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24460..25416
DNA (957bp) protein (319aa)
Predicted transcriptional regulator n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K975_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL01388.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_068_000M1_scaffold_244_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25569..26789
DNA (1221bp) protein (407aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SET3_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDP19766.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Protein of unknown function (DUF3048).
L3_068_000M1_scaffold_244_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26802..27878
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KB82_9FIRM
Protein of unknown function (DUF3048).
Uncharacterized protein {ECO:0000313|EMBL:CBL02095.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_068_000M1_scaffold_244_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28143..28748)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KB83_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02096.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_068_000M1_scaffold_244_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28845..29519)
DNA (675bp) protein (225aa)
Fructose-2,6-bisphosphatase (EC:3.1.3.73)
Phosphoglycerate mutase family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SET7_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EDP19770.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Displaying items 1-30 of 79 in total

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