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L3_068_000M1_scaffold_251

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_251_1
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(148..729)
DNA (582bp) protein (194aa)
HAD hydrolase, family IA, variant 3 n=5 Tax=Bacteroidales RepID=C7XA59_9PORP
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EEY84266.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
haloacid dehalogenase
L3_068_000M1_scaffold_251_2
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(902..2149)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6L9B9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU51135.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_068_000M1_scaffold_251_3
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2221..3144)
DNA (924bp) protein (308aa)
D-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EFK61389.1}; EC=1.1.1.95 {ECO:0000313|EMBL:EFK61389.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
D-3-phosphoglycerate dehydrogenase n=9 Tax=Bacteroidales RepID=A6L9B8_PARD8
D-3-phosphoglycerate dehydrogenase
L3_068_000M1_scaffold_251_4
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3162..4229)
DNA (1068bp) protein (356aa)
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Phosphoserine aminotransferase n=9 Tax=Bacteroidales RepID=SERC_PARD8
L3_068_000M1_scaffold_251_5
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4362..5633)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z931_9PORP
ATPase AAA family {ECO:0000313|EMBL:CDB48634.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
recombination factor protein RarA
L3_068_000M1_scaffold_251_6
unknown

Not on your lists

comp(5686..5781)
DNA (96bp) protein (32aa)

This feature has no annotations

L3_068_000M1_scaffold_251_7
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6115..7644)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6L9B5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU51131.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_068_000M1_scaffold_251_8
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7706..10903)
DNA (3198bp) protein (1066aa)
Outer membrane protein n=5 Tax=Bacteroidales RepID=D7IWE5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85942.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_068_000M1_scaffold_251_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11594..14767
DNA (3174bp) protein (1058aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Parabacteroides RepID=C7XA52_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEU51129.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_068_000M1_scaffold_251_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14783..16312
DNA (1530bp) protein (510aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K6B5I8_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI07260.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_068_000M1_scaffold_251_11
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16403..17581)
DNA (1179bp) protein (393aa)
Integrase n=6 Tax=Bacteroidales RepID=A6L9B0_PARD8
integrase
Integrase {ECO:0000313|EMBL:CDB48629.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_068_000M1_scaffold_251_12
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17770..18300)
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AHZ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB48628.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_068_000M1_scaffold_251_13
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18314..19786)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7XA48_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB48627.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_068_000M1_scaffold_251_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19814..22756)
DNA (2943bp) protein (981aa)
SusC/RagA family TonB-linked outer membrane protein n=6 Tax=Bacteroidales RepID=K6A5P9_9PORP
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS67715.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_068_000M1_scaffold_251_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23454..26498
DNA (3045bp) protein (1015aa)
Outer membrane protein n=7 Tax=Bacteroidales RepID=D7IWD8_9BACE
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS65461.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_068_000M1_scaffold_251_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26519..27889
DNA (1371bp) protein (457aa)
SusD family protein n=5 Tax=Bacteroidales RepID=C7XA45_9PORP
hypothetical protein
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS65460.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_068_000M1_scaffold_251_17
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27967..29424)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A7A3_9PORP
Molybdate transport system ATP-binding component {ECO:0000313|EMBL:CDB48623.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
molybdenum transport ATP-binding protein
L3_068_000M1_scaffold_251_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29576..31063)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6L9A3_PARD8
Susd and RagB outer membrane lipofamily protein {ECO:0000313|EMBL:KDS65459.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_068_000M1_scaffold_251_19
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31089..34334)
DNA (3246bp) protein (1082aa)
Outer membrane protein n=4 Tax=Bacteroidales RepID=D7IWD4_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFI07251.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_068_000M1_scaffold_251_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34896..35564
DNA (669bp) protein (223aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=K6AJH1_9PORP
secreted glycosylhydrolase
Putative secreted glycosylhydrolase {ECO:0000313|EMBL:ABR42265.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_068_000M1_scaffold_251_21
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35616..36383)
DNA (768bp) protein (256aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Acetylglutamate kinase n=9 Tax=Bacteroidales RepID=ARGB_PARD8
acetylglutamate kinase
L3_068_000M1_scaffold_251_22
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36831..38084
DNA (1254bp) protein (418aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWD1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI07248.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_068_000M1_scaffold_251_23
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38081..39670
DNA (1590bp) protein (530aa)
Type I phosphodiesterase / nucleotide pyrophosphatase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAI2_9BACE
Type I phosphodiesterase / nucleotide pyrophosphatase {ECO:0000313|EMBL:EEY84245.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
alkaline phosphatase
L3_068_000M1_scaffold_251_24
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39836..43216
DNA (3381bp) protein (1127aa)
Protein translocase subunit SecA n=8 Tax=Bacteroidales RepID=SECA_PARD8
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_068_000M1_scaffold_251_25
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43313..44407
DNA (1095bp) protein (365aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Alanine dehydrogenase n=4 Tax=Bacteroidales RepID=D0TAI0_9BACE
alanine dehydrogenase
L3_068_000M1_scaffold_251_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44563..45306
DNA (744bp) protein (248aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6L995_PARD8
hypothetical protein
TPR repeat family protein {ECO:0000313|EMBL:KDS67348.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_068_000M1_scaffold_251_27
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45398..46726)
DNA (1329bp) protein (443aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Membrane-associated zinc metalloprotease n=4 Tax=Bacteroidales RepID=A6L994_PARD8
membrane-associated zinc metalloprotease
L3_068_000M1_scaffold_251_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46757..47908)
DNA (1152bp) protein (384aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Parabacteroides sp. D25 RepID=K6ATT6_9PORP
L3_068_000M1_scaffold_251_29
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47915..48778)
DNA (864bp) protein (288aa)
Peptidase, M23 family n=3 Tax=Bacteroidales RepID=C7XA32_9PORP
Peptidase, M23 family {ECO:0000313|EMBL:EEU51109.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
membrane peptidase
L3_068_000M1_scaffold_251_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48807..49328)
DNA (522bp) protein (174aa)
Ribosome maturation factor RimM n=4 Tax=Bacteroidales RepID=RIMM_PARD8
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Displaying items 1-30 of 53 in total

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