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L3_068_000M1_scaffold_281

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_281_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..2135)
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66621.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_068_000M1_scaffold_281_2
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

comp(2153..2740)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7A1U5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD47276.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
hypothetical protein
L3_068_000M1_scaffold_281_3
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2803..3198)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RRB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47894.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L3_068_000M1_scaffold_281_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3300..3710)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99565.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_068_000M1_scaffold_281_5
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3797..4147)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SMS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47897.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_068_000M1_scaffold_281_6
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(4203..5375)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EIL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA89872.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
L3_068_000M1_scaffold_281_7
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5395..6540)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NP75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ03919.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
L3_068_000M1_scaffold_281_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6751..8190)
DNA (1440bp) protein (480aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MN32_9FIRM
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CBL35165.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_068_000M1_scaffold_281_9
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8202..8411)
DNA (210bp) protein (70aa)
Predicted transcriptional regulator n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FRK7_9FIRM
Predicted transcriptional regulator {ECO:0000313|EMBL:CDE17959.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Predicted transcriptional regulator
L3_068_000M1_scaffold_281_10
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8760..9062
DNA (303bp) protein (101aa)
Resolvase domain protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DMH1_DESRL
resolvase domain-containing protein
Resolvase domain protein {ECO:0000313|EMBL:AEG61732.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
L3_068_000M1_scaffold_281_11
unknown

Not on your lists

comp(9295..9690)
DNA (396bp) protein (132aa)

This feature has no annotations

L3_068_000M1_scaffold_281_12
unknown

Not on your lists

comp(9709..9969)
DNA (261bp) protein (87aa)

This feature has no annotations

L3_068_000M1_scaffold_281_13
unknown

Not on your lists

comp(10159..10425)
DNA (267bp) protein (89aa)

This feature has no annotations

L3_068_000M1_scaffold_281_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11033..11938)
DNA (906bp) protein (302aa)
ADP-ribosylglycohydrolase n=2 Tax=Parabacteroides merdae RepID=A7AC62_9PORP
hypothetical protein
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:EDN87845.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_068_000M1_scaffold_281_15
unknown

Not on your lists

comp(11928..12923)
DNA (996bp) protein (332aa)

This feature has no annotations

L3_068_000M1_scaffold_281_16
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13027..13440)
DNA (414bp) protein (138aa)
Cell surface protein n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5Y7B7_TREAZ
Cell surface protein {ECO:0000313|EMBL:AEF80294.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
Ig domain-containing protein
L3_068_000M1_scaffold_281_17
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13801..14325)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MS98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01605.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_068_000M1_scaffold_281_18
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14303..14500)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0MRU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC38520.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_068_000M1_scaffold_281_19
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14605..15171
DNA (567bp) protein (189aa)
TrkA N-terminal domain protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MPN1_9FIRM
TrkA N-terminal domain protein {ECO:0000313|EMBL:CDC01603.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
K+ transport systems, NAD-binding component
L3_068_000M1_scaffold_281_20
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15194..15712
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R6L3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38556.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
LysR substrate binding domain.
L3_068_000M1_scaffold_281_21
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15773..16684
DNA (912bp) protein (304aa)
Putative magnesium and cobalt transport protein CorA n=1 Tax=Clostridium sp. CAG:352 RepID=R6QPN5_9CLOT
Putative magnesium and cobalt transport protein CorA {ECO:0000313|EMBL:CDC38558.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Mg2+ and Co2+ transporters
L3_068_000M1_scaffold_281_22
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16713..17138
DNA (426bp) protein (142aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R026_9CLOT
Universal stress protein family./Osmosensitive K+ channel His kinase sensor domain.
L3_068_000M1_scaffold_281_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17719..18003
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DR88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81324.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L3_068_000M1_scaffold_281_24
unknown

Not on your lists

18048..18335
DNA (288bp) protein (96aa)

This feature has no annotations

L3_068_000M1_scaffold_281_25
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18322..19929
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J8H9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT24068.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L3_068_000M1_scaffold_281_26
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20166..20282
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MPL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01588.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_068_000M1_scaffold_281_27
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20279..20626
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L953_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC01587.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_068_000M1_scaffold_281_28
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20732..21109
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N5Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01586.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_068_000M1_scaffold_281_29
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21528..21719
DNA (192bp) protein (64aa)
DNA/RNA helicase superfamily II n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MS80_9FIRM
DNA/RNA helicase superfamily II {ECO:0000313|EMBL:CDC01585.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_068_000M1_scaffold_281_30
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21726..22802
DNA (1077bp) protein (359aa)
DNA/RNA helicase superfamily II n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MS80_9FIRM
DNA/RNA helicase superfamily II {ECO:0000313|EMBL:CDC01585.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
Displaying items 1-30 of 75 in total

View Taxonomy