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L3_068_000M1_scaffold_324

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_324_1
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

64..1746
DNA (1683bp) protein (561aa)
O-GlcNAcase BT_4395 n=4 Tax=Parabacteroides RepID=C7X897_9PORP
O-GlcNAcase NagJ {ECO:0000313|EMBL:EFI08382.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
glycoside hydrolase
L3_068_000M1_scaffold_324_2
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1888..2553
DNA (666bp) protein (222aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Endonuclease III n=9 Tax=Bacteroidales RepID=A6LB42_PARD8
endonuclease III
L3_068_000M1_scaffold_324_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2550..3431
DNA (882bp) protein (294aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=A6LB43_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU52307.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_068_000M1_scaffold_324_4
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3428..4534)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IHD5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49728.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
capsular polysaccharide biosynthesis protein
L3_068_000M1_scaffold_324_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4541..6919)
DNA (2379bp) protein (793aa)
Polysaccharide biosynthesis/export protein n=5 Tax=Bacteroidales RepID=C7X8A1_9PORP
Putative capsule polysaccharide export protein {ECO:0000313|EMBL:ABR42909.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
capsule polysaccharide export protein
L3_068_000M1_scaffold_324_6
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7038..7793)
DNA (756bp) protein (252aa)
Metal-dependent hydrolase n=5 Tax=Bacteroidales RepID=A6LB46_PARD8
hydrolase
Uncharacterized protein {ECO:0000313|EMBL:EKN29180.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_068_000M1_scaffold_324_7
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7793..8806)
DNA (1014bp) protein (338aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Parabacteroides RepID=C7X8A3_9PORP
UDP-N-acetylenolpyruvoylglucosamine reductase
L3_068_000M1_scaffold_324_8
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8907..9743
DNA (837bp) protein (279aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LB48_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK62378.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_068_000M1_scaffold_324_9
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9927..10211
DNA (285bp) protein (95aa)
DNA-binding protein HU-beta n=9 Tax=Bacteroidales RepID=A6LB49_PARD8
DNA-binding protein HU-beta
DNA-binding protein HU {ECO:0000313|EMBL:EEY84806.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_068_000M1_scaffold_324_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10364..11017
DNA (654bp) protein (218aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=2 Tax=Parabacteroides RepID=C7X8A6_9PORP
Uracil phosphoribosyltransferase {ECO:0000313|EMBL:EKN22425.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_068_000M1_scaffold_324_11
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10960..12858)
DNA (1899bp) protein (633aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides RepID=C7X8A7_9PORP
two-component system sensor histidine kinase
L3_068_000M1_scaffold_324_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12997..16464)
DNA (3468bp) protein (1156aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6B308_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22423.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L3_068_000M1_scaffold_324_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16477..17733)
DNA (1257bp) protein (419aa)
Tat pathway signal sequence domain protein n=4 Tax=Parabacteroides RepID=C7X8A9_9PORP
NADH-dependent dehydrogenase
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:KDS62715.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_068_000M1_scaffold_324_14
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17879..19279)
DNA (1401bp) protein (467aa)
Alpha-N-acetylgalactosaminidase {ECO:0000313|EMBL:EEU52318.1}; EC=3.2.1.49 {ECO:0000313|EMBL:EEU52318.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Glycosyl hydrolase family 109 protein n=5 Tax=Bacteroidales RepID=GH109_PARD8
Gfo/Idh/MocA family oxidoreductase
L3_068_000M1_scaffold_324_15
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19381..20889)
DNA (1509bp) protein (503aa)
Arylsulfatase {ECO:0000313|EMBL:EEU52319.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEU52319.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Arylsulfatase n=2 Tax=Parabacteroides RepID=C7X8B1_9PORP
arylsulfatase
L3_068_000M1_scaffold_324_16
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20914..22605)
DNA (1692bp) protein (564aa)
SusD family protein n=5 Tax=Bacteroidales RepID=C7X8B2_9PORP
Outer membrane protein {ECO:0000313|EMBL:EFI08367.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_068_000M1_scaffold_324_17
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22620..25922)
DNA (3303bp) protein (1101aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides RepID=C7X8B3_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEU52321.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_068_000M1_scaffold_324_18
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26006..27076)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=R6ITC9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49714.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
anti-sigma factor
L3_068_000M1_scaffold_324_19
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27110..27703)
DNA (594bp) protein (198aa)
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Parabacteroides RepID=K6AFE2_9PORP
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDB49713.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
RNA polymerase ECF-type sigma factor
L3_068_000M1_scaffold_324_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27997..29262)
DNA (1266bp) protein (422aa)
ATP-dependent RNA helicase DeaD n=5 Tax=Bacteroidales RepID=A6LB60_PARD8
ATP-dependent RNA helicase DeaD
DEAD/DEAH box helicase family protein {ECO:0000313|EMBL:KDS68616.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_068_000M1_scaffold_324_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29371..31206
DNA (1836bp) protein (612aa)
ATP-dependent DNA helicase RecQ n=2 Tax=Parabacteroides RepID=C7X8B7_9PORP
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EKN22414.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
ATP-dependent DNA helicase
L3_068_000M1_scaffold_324_22
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31301..32479
DNA (1179bp) protein (393aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=C7X8B8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52326.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_068_000M1_scaffold_324_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32486..34003
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5Z6I2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22412.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L3_068_000M1_scaffold_324_24
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34057..36507
DNA (2451bp) protein (817aa)
TonB-dependent receptor n=2 Tax=Parabacteroides RepID=C7X8C0_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EEU52328.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
outer membrane receptor protein
L3_068_000M1_scaffold_324_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36512..38116
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AFS8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22410.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
transcriptional regulator
L3_068_000M1_scaffold_324_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38297..38686
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6A330_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22409.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
transcriptional regulator
L3_068_000M1_scaffold_324_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38695..39549
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6B2Z4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22408.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L3_068_000M1_scaffold_324_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39571..42087
DNA (2517bp) protein (839aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z6H7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29202.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_068_000M1_scaffold_324_29
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42102..43595
DNA (1494bp) protein (498aa)
Dihydropyrimidine dehydrogenase {ECO:0000313|EMBL:EEU52333.1}; EC=1.3.1.1 {ECO:0000313|EMBL:EEU52333.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
dihydropyrimidine dehydrogenase (EC:1.3.1.1)
Dihydropyrimidine dehydrogenase n=2 Tax=Parabacteroides RepID=C7X8C5_9PORP
L3_068_000M1_scaffold_324_30
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43714..45735
DNA (2022bp) protein (674aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K6AFS3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29204.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
Displaying items 1-30 of 136 in total

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