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L3_068_000M1_scaffold_335

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_335_1
unknown

Not on your lists

comp(11..193)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 329 str. F0087 RepID=F3XSX6_9FLAO
L3_068_000M1_scaffold_335_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

339..1148
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THN1_9BACE
Surface domain protein {ECO:0000313|EMBL:KDS46191.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
possible bacterial surface protein
L3_068_000M1_scaffold_335_3
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1160..1993
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THN0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82634.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_068_000M1_scaffold_335_4
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2418..3557)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THM9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82633.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_068_000M1_scaffold_335_5
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3799..4443
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THM8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82632.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_068_000M1_scaffold_335_6
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4448..5041
DNA (594bp) protein (198aa)
RNA polymerase sigma-70 factor n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THM7_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EEY82631.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
RNA polymerase ECF-type sigma factor
L3_068_000M1_scaffold_335_7
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5077..5292
DNA (216bp) protein (72aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THM6_9BACE
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EEY82630.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
anti-sigma factor
L3_068_000M1_scaffold_335_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5289..6008
DNA (720bp) protein (240aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THM6_9BACE
FecR family protein {ECO:0000313|EMBL:KDS46189.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
anti-sigma factor
L3_068_000M1_scaffold_335_9
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6222..9599
DNA (3378bp) protein (1126aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroidales RepID=K6BRI9_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN30758.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_068_000M1_scaffold_335_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9604..11163
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5ZD93_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24797.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L3_068_000M1_scaffold_335_11
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11187..12593
DNA (1407bp) protein (469aa)
Sulfatase family protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRG4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ84183.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
arylsulfatase
L3_068_000M1_scaffold_335_12
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12606..13985
DNA (1380bp) protein (460aa)
Putative cerebroside-sulfatase n=1 Tax=Parabacteroides sp. D13 RepID=C7XBQ2_9PORP
Putative cerebroside-sulfatase {ECO:0000313|EMBL:EEU50252.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
arylsulfatase
L3_068_000M1_scaffold_335_13
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14010..15368
DNA (1359bp) protein (453aa)
Arylsulfatase {ECO:0000313|EMBL:EEY82625.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEY82625.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Arylsulfatase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THM1_9BACE
secreted sulfatase
L3_068_000M1_scaffold_335_14
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15459..16067
DNA (609bp) protein (203aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Bacteroidales RepID=K6BRJ4_9PORP
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKN30763.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
RNA polymerase ECF-type sigma factor
L3_068_000M1_scaffold_335_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16267..17346
DNA (1080bp) protein (360aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Parabacteroides RepID=E1Z0B4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23727.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
anti-sigma factor
L3_068_000M1_scaffold_335_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17481..20858
DNA (3378bp) protein (1126aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides RepID=E1Z0B3_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN23728.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
putative outer membrane protein
L3_068_000M1_scaffold_335_17
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20870..22402
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B3Y6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30766.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_068_000M1_scaffold_335_18
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22493..23536
DNA (1044bp) protein (348aa)
Sporulation and cell division repeat protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XBQ9_9PORP
Sporulation and cell division repeat protein {ECO:0000313|EMBL:EEU50259.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_068_000M1_scaffold_335_19
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23569..23769)
DNA (201bp) protein (67aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=C7XBR0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50260.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_068_000M1_scaffold_335_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23798..24748)
DNA (951bp) protein (317aa)
SPFH domain/Band 7 family protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRH4_9BACE
SPFH domain/Band 7 family protein {ECO:0000313|EMBL:EFI08551.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
integral membrane protein
L3_068_000M1_scaffold_335_21
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24884..26887
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B4L9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30770.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
helicase
L3_068_000M1_scaffold_335_22
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26948..30238)
DNA (3291bp) protein (1097aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=D0THL2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ84197.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
OmpA-like protein
L3_068_000M1_scaffold_335_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30675..34028
DNA (3354bp) protein (1118aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z0A6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23735.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
OmpA-like protein
L3_068_000M1_scaffold_335_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34111..35316
DNA (1206bp) protein (402aa)
Type I phosphodiesterase / nucleotide pyrophosphatase n=2 Tax=Parabacteroides RepID=E1Z0A5_9PORP
Type I phosphodiesterase / nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:KDS46215.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
type I phosphodiesterase/nucleotide pyrophosphatase
L3_068_000M1_scaffold_335_25
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35404..36252)
DNA (849bp) protein (283aa)
AP endonuclease, family 2 n=2 Tax=Parabacteroides RepID=C7XBR5_9PORP
AP endonuclease, family 2 {ECO:0000313|EMBL:EEU50265.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
D-tagatose 3-epimerase
L3_068_000M1_scaffold_335_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36357..36572)
DNA (216bp) protein (72aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LEB7_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU50266.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_068_000M1_scaffold_335_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36699..38192)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LEB6_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44030.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_068_000M1_scaffold_335_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38631..40490
DNA (1860bp) protein (620aa)
Methylmalonyl-CoA mutase, small subunit n=2 Tax=Parabacteroides RepID=C7XBR8_9PORP
Methylmalonyl-CoA mutase, small subunit {ECO:0000313|EMBL:EKN30777.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
methylmalonyl-CoA mutase, small subunit
L3_068_000M1_scaffold_335_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40503..42650
DNA (2148bp) protein (716aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase N-terminal domain protein {ECO:0000313|EMBL:KDS58397.1}; EC=5.4.99.- {ECO:0000313|EMBL:KDS58397.1};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Methylmalonyl-CoA mutase, large subunit n=9 Tax=Bacteroidales RepID=A6LEB4_PARD8
L3_068_000M1_scaffold_335_30
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42780..43634
DNA (855bp) protein (285aa)
pantothenate kinase (EC:2.7.1.33)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6ILT6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50255.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Displaying items 1-30 of 54 in total

View Taxonomy