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L3_068_000M1_scaffold_386

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_386_1
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..720
DNA (720bp) protein (240aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=U2ETX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98302.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
plasmid segregation actin-type ATPase ParM
L3_068_000M1_scaffold_386_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

725..1096
DNA (372bp) protein (124aa)
Uncharacterized protein n=5 Tax=root RepID=B0G695_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23073.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_068_000M1_scaffold_386_3
unknown

Not on your lists

1116..1223
DNA (108bp) protein (36aa)

This feature has no annotations

L3_068_000M1_scaffold_386_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1247..1576)
DNA (330bp) protein (110aa)
DNA-binding helix-turn-helix protein n=6 Tax=root RepID=B0G696_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23074.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Helix-turn-helix.
L3_068_000M1_scaffold_386_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1947..2387
DNA (441bp) protein (147aa)
Sigma-70, region 4 n=5 Tax=root RepID=B0G697_9FIRM
Sigma-70, region 4 {ECO:0000313|EMBL:EDR46658.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Sigma-70, region 4.
L3_068_000M1_scaffold_386_6
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2387..2575
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G698_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98298.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_068_000M1_scaffold_386_7
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2706..4061)
DNA (1356bp) protein (452aa)
MATE efflux family protein n=5 Tax=root RepID=B0G699_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDR46660.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
putative efflux protein, MATE family
L3_068_000M1_scaffold_386_8
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4272..4796
DNA (525bp) protein (175aa)
Transcriptional regulator, PadR family n=4 Tax=root RepID=B0G6A0_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDR46661.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
transcriptional regulator, PadR family
L3_068_000M1_scaffold_386_9
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4950..5291)
DNA (342bp) protein (114aa)
Transcriptional regulatory protein, C-terminal domain protein n=4 Tax=root RepID=B0G6A1_9FIRM
Transcriptional regulatory protein {ECO:0000313|EMBL:ERI98295.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
two-component response regulator
L3_068_000M1_scaffold_386_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5545..5856
DNA (312bp) protein (104aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8C6U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23079.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
bacR; response regulator
L3_068_000M1_scaffold_386_11
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6062..6721
DNA (660bp) protein (220aa)
Resolvase, N-terminal domain protein n=2 Tax=Lachnospiraceae RepID=B0G6A3_9FIRM
Resolvase protein {ECO:0000313|EMBL:ERI98293.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_068_000M1_scaffold_386_12
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6768..6989
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6A4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46665.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L3_068_000M1_scaffold_386_13
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6999..7355
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98291.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_068_000M1_scaffold_386_14
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7526..7888
DNA (363bp) protein (121aa)
Toxin-antitoxin system, antitoxin component, HicB family n=4 Tax=Clostridiales RepID=B0G6A7_9FIRM
Toxin-antitoxin system, antitoxin component, HicB family {ECO:0000313|EMBL:EDR46668.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L3_068_000M1_scaffold_386_15
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7952..9316)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98288.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Predicted ATPase (AAA+ superfamily)
L3_068_000M1_scaffold_386_16
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9406..9879)
DNA (474bp) protein (158aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G6A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98287.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_068_000M1_scaffold_386_17
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9901..10404)
DNA (504bp) protein (168aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88196.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
conserved hypothetical protein, ribA/ribD-fused
L3_068_000M1_scaffold_386_18
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10482..12476)
DNA (1995bp) protein (665aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=4 Tax=root RepID=B0G6B1_9FIRM
L3_068_000M1_scaffold_386_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13043..13291
DNA (249bp) protein (83aa)
Transcriptional regulatory protein, C-terminal domain protein n=3 Tax=Clostridiales RepID=B0G6B3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23089.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_068_000M1_scaffold_386_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13386..14060
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C7T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23090.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_068_000M1_scaffold_386_21
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14030..14935
DNA (906bp) protein (302aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Lachnospiraceae RepID=B0G6B5_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L3_068_000M1_scaffold_386_22
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14907..15206
DNA (300bp) protein (100aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Lachnospiraceae RepID=B0G6B5_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L3_068_000M1_scaffold_386_23
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15277..16341
DNA (1065bp) protein (355aa)
Uncharacterized protein n=3 Tax=root RepID=B0G6B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96095.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_068_000M1_scaffold_386_24
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16338..16994
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7FZY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23093.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_068_000M1_scaffold_386_25
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16999..17871
DNA (873bp) protein (291aa)
ABC transporter, ATP-binding protein n=5 Tax=Clostridiales RepID=B0G6B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23094.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ABC-type multidrug transport system, ATPase component
L3_068_000M1_scaffold_386_26
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17934..18335
DNA (402bp) protein (134aa)
Transcriptional regulatory protein, C-terminal domain protein n=6 Tax=root RepID=B0G6B9_9FIRM
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EDR46680.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
two-component response regulator
L3_068_000M1_scaffold_386_27
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18368..18652)
DNA (285bp) protein (95aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6C0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23096.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_068_000M1_scaffold_386_28
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18708..19316)
DNA (609bp) protein (203aa)
Uncharacterized protein n=7 Tax=root RepID=B0G6C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23097.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_068_000M1_scaffold_386_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19316..19693)
DNA (378bp) protein (126aa)
Uncharacterized protein n=5 Tax=root RepID=K1TG81_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDE20093.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_068_000M1_scaffold_386_30
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19674..20261)
DNA (588bp) protein (196aa)
Uncharacterized protein n=6 Tax=root RepID=R7G268_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23099.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Displaying items 1-30 of 86 in total

View Taxonomy