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L3_068_000M1_scaffold_392

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_392_1
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..180
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MU13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02245.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_068_000M1_scaffold_392_2
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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364..1380
DNA (1017bp) protein (339aa)
Transposase of ISGme5, ISL3 family n=2 Tax=Geobacter metallireducens RepID=Q39W28_GEOMG
transposase of ISGme5, ISL3 family
Transposase of ISGme5, ISL3 family {ECO:0000313|EMBL:ABB31546.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
L3_068_000M1_scaffold_392_3
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1518..2240
DNA (723bp) protein (241aa)
Response regulator of the LytR/AlgR family n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8D7_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBL15882.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_068_000M1_scaffold_392_4
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2233..3555
DNA (1323bp) protein (441aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8D6_9FIRM
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase {ECO:0000313|EMBL:CBL15881.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_068_000M1_scaffold_392_5
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3639..4232
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QVF5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40583.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
accessory gene regulator
L3_068_000M1_scaffold_392_6
unknown

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4327..4479
DNA (153bp) protein (51aa)

This feature has no annotations

L3_068_000M1_scaffold_392_7
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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4747..5472
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LYQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY78132.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
peptidase C39 like family protein
L3_068_000M1_scaffold_392_8
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5542..6756
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E5L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84037.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L3_068_000M1_scaffold_392_9
unknown

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7183..7779
DNA (597bp) protein (199aa)

This feature has no annotations

L3_068_000M1_scaffold_392_10
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7776..9110
DNA (1335bp) protein (445aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Eubacterium sp. CAG:581 PF7_9FIRM">RepID=R7NPF7_9FIRM
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:CDF13978.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
L3_068_000M1_scaffold_392_11
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9127..10278
DNA (1152bp) protein (384aa)
Fucose 4-O-acetylase and related acetyltransferases n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5I0_9FIRM
Fucose 4-O-acetylase and related acetyltransferases
Fucose 4-O-acetylase and related acetyltransferases {ECO:0000313|EMBL:CBL14875.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_068_000M1_scaffold_392_12
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

10309..11847
DNA (1539bp) protein (513aa)
Putative uncharacterized protein id=4632542 bin=GWF2_Clostridiales_36_10 species=Clostridium celatum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
spore coat protein CotH
Tax=GWF2_Clostridiales_36_10_curated
L3_068_000M1_scaffold_392_13
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12487..13041
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LV01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62625.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_068_000M1_scaffold_392_14
unknown

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13269..13418
DNA (150bp) protein (50aa)

This feature has no annotations

L3_068_000M1_scaffold_392_15
unknown

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13551..13688
DNA (138bp) protein (46aa)
hypothetical protein predicted by Glimmer/Critica
L3_068_000M1_scaffold_392_16
unknown

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13681..13836
DNA (156bp) protein (52aa)

This feature has no annotations

L3_068_000M1_scaffold_392_17
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13933..15453
DNA (1521bp) protein (507aa)
yokA; resolvase YokA (EC:3.1.-.-)
Resolvase n-terminal:recombinase putative n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MIP1_9FIRM
Resolvase n-terminal:recombinase putative {ECO:0000313|EMBL:CCY91585.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L3_068_000M1_scaffold_392_18
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15467..16351
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MPJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91584.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Putative recombinase
L3_068_000M1_scaffold_392_19
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16312..17946
DNA (1635bp) protein (545aa)
Resolvase N-terminal domain protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MJI3_9FIRM
Resolvase N-terminal domain protein {ECO:0000313|EMBL:CCY91583.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_068_000M1_scaffold_392_20
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18253..21225
DNA (2973bp) protein (991aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2ABZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ21944.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
N-6 DNA methylase
L3_068_000M1_scaffold_392_21
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21230..21898
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A7A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ21945.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
L3_068_000M1_scaffold_392_22
unknown

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22171..22296
DNA (126bp) protein (42aa)

This feature has no annotations

L3_068_000M1_scaffold_392_23
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22824..23054
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036DB69D
Uncharacterized protein {ECO:0000313|EMBL:ERJ00363.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L3_068_000M1_scaffold_392_24
unknown

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23041..23352
DNA (312bp) protein (104aa)

This feature has no annotations

L3_068_000M1_scaffold_392_25
unknown

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23637..23915
DNA (279bp) protein (93aa)

This feature has no annotations

L3_068_000M1_scaffold_392_26
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24064..24657
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KYC6_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL01130.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_068_000M1_scaffold_392_27
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24670..26145
DNA (1476bp) protein (492aa)
Putative uncharacterized protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TDA0_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGD47538.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
hypothetical protein
L3_068_000M1_scaffold_392_28
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26824..27456
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N1A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02049.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
acyl-CoA thioester hydrolase family protein
L3_068_000M1_scaffold_392_29
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27833..28810
DNA (978bp) protein (326aa)
Oxidoreductase NAD-binding domain protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MQS8_9FIRM
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:CDC02048.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Predicted dehydrogenases and related proteins
L3_068_000M1_scaffold_392_30
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29080..29724)
DNA (645bp) protein (215aa)
Channel protein hemolysin III family n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NWF7_9FIRM
Channel protein hemolysin III family {ECO:0000313|EMBL:CDC02047.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hlyIII; channel protein, hemolysin III family
Displaying items 1-30 of 59 in total

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