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L3_068_000M1_scaffold_430

Search features with annotation key words

Displaying items 1-30 of 131 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_430_1
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47..1294)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9S4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74914.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_068_000M1_scaffold_430_2
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1317..2642)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAD8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74915.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_068_000M1_scaffold_430_3
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2655..4067)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9Y3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74916.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_068_000M1_scaffold_430_4
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4074..5969)
DNA (1896bp) protein (632aa)
Fibronectin type III domain-containing protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CB13_9CLOT
Fibronectin type III domain-containing protein {ECO:0000313|EMBL:CDD74917.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Leucine-rich repeat (LRR) protein
L3_068_000M1_scaffold_430_5
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6142..7131
DNA (990bp) protein (330aa)
Abi-like protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA32_9CLOT
Abi-like protein {ECO:0000313|EMBL:CDD74971.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Abi-like protein.
L3_068_000M1_scaffold_430_6
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7306..9399)
DNA (2094bp) protein (698aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
polynucleotide phosphorylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Clostridium sp. CAG:167 RepID=R5VKU3_9CLOT
L3_068_000M1_scaffold_430_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9544..9996)
DNA (453bp) protein (151aa)
Hydrolase NUDIX family n=1 Tax=Clostridium sp. CAG:62 RepID=R7CCC4_9CLOT
Hydrolase NUDIX family {ECO:0000313|EMBL:CDD74973.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_068_000M1_scaffold_430_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10088..10354)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9X3_9CLOT
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
SSU ribosomal protein S15P
L3_068_000M1_scaffold_430_9
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10472..13675)
DNA (3204bp) protein (1068aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAJ5_9CLOT
carB; carbamoyl phosphate synthase large subunit
L3_068_000M1_scaffold_430_10
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13690..14787)
DNA (1098bp) protein (366aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA37_9CLOT
carbamoyl phosphate synthase small subunit
L3_068_000M1_scaffold_430_11
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14799..15284)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CB75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74977.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
response regulator receiver/ANTAR domain-containing protein
L3_068_000M1_scaffold_430_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15392..16699)
DNA (1308bp) protein (436aa)
glutamine synthetase, type I (EC:6.3.1.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CCC7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74978.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_068_000M1_scaffold_430_13
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16763..18244)
DNA (1482bp) protein (494aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.14 1.4.1.13)
Glutamate synthase (NADH) small subunit n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9X7_9CLOT
Glutamate synthase (NADH) small subunit {ECO:0000313|EMBL:CDD74979.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_068_000M1_scaffold_430_14
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18281..22840)
DNA (4560bp) protein (1520aa)
Glutamate synthase domain 2 (EC:1.4.1.13 1.4.1.14)
Glutamate synthase domain 2 n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAJ9_9CLOT
Glutamate synthase domain 2 {ECO:0000313|EMBL:CDD74980.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_068_000M1_scaffold_430_15
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23038..23619)
DNA (582bp) protein (194aa)
Segregation and condensation protein B n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5E7_9CLOT
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
segregation and condensation protein B
L3_068_000M1_scaffold_430_16
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23616..24383)
DNA (768bp) protein (256aa)
Segregation and condensation protein A n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5T2_9CLOT
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
segregation and condensation protein A
L3_068_000M1_scaffold_430_17
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24441..25274)
DNA (834bp) protein (278aa)
Putative Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5A7_9CLOT
Putative Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:CDD73299.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Predicted phosphohydrolases
L3_068_000M1_scaffold_430_18
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25440..27713)
DNA (2274bp) protein (758aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3Z4_9CLOT
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
L3_068_000M1_scaffold_430_19
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27893..29104
DNA (1212bp) protein (404aa)
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5E2_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDD73296.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_068_000M1_scaffold_430_20
unknown

Not on your lists

29104..29280
DNA (177bp) protein (59aa)

This feature has no annotations

L3_068_000M1_scaffold_430_21
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29314..29412)
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5S7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73295.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_068_000M1_scaffold_430_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29649..30161)
DNA (513bp) protein (171aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5A4_9CLOT
L3_068_000M1_scaffold_430_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30190..32169)
DNA (1980bp) protein (660aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7M2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73293.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Leucyl aminopeptidase (aminopeptidase T)
L3_068_000M1_scaffold_430_24
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32184..32618)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C6D2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73292.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
helix-turn-helix domain protein
L3_068_000M1_scaffold_430_25
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32776..33558
DNA (783bp) protein (261aa)
Putative methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5E0_9CLOT
Putative methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDD73291.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
putative methyl-accepting chemotaxis protein
L3_068_000M1_scaffold_430_26
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33535..34725)
DNA (1191bp) protein (397aa)
Major Facilitator Superfamily n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5S4_9CLOT
Major Facilitator Superfamily {ECO:0000313|EMBL:CDD73290.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Major Facilitator Superfamily.
L3_068_000M1_scaffold_430_27
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34868..35701
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C599_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73289.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Protein kinase domain.
L3_068_000M1_scaffold_430_28
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35876..36169
DNA (294bp) protein (98aa)
Positive regulator of late transcription n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7L8_9CLOT
Positive regulator of late transcription {ECO:0000313|EMBL:CDD73288.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Mor transcription activator family.
L3_068_000M1_scaffold_430_29
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36166..36639
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C6C9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73287.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_068_000M1_scaffold_430_30
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36704..37717)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5VLM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ91385.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
Displaying items 1-30 of 131 in total

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