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L3_068_000M1_scaffold_458

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_458_1
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(225..608)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RUG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC46666.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_068_000M1_scaffold_458_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(735..1175)
DNA (441bp) protein (147aa)
Winged helix family two component transcriptional regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP22_9FIRM
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:CCZ79835.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
winged helix family two component transcriptional regulator
L3_068_000M1_scaffold_458_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1175..1816)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8Q6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79836.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_068_000M1_scaffold_458_4
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2309..2794)
DNA (486bp) protein (162aa)
Acetyltransferase GNAT family n=1 Tax=Blautia sp. CAG:237 RepID=R6KML1_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDB76423.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Acetyltransferase (GNAT) family.
L3_068_000M1_scaffold_458_5
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3117..3434)
DNA (318bp) protein (106aa)
Cytidylate kinase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T1F2_ROSHA
cytidylate kinase
Cytidylate kinase {ECO:0000313|EMBL:AEN96382.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_068_000M1_scaffold_458_6
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3437..4801)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R5N0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF45151.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
putative efflux protein, MATE family
L3_068_000M1_scaffold_458_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5028..6212)
DNA (1185bp) protein (395aa)
Probable hydroxymethylpyrimidine transporter CytX n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM17_9FIRM
Probable hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:CCZ79075.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
probable hydroxymethylpyrimidine transporter CytX
L3_068_000M1_scaffold_458_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6264..7058)
DNA (795bp) protein (265aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6K8_9FIRM
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CCZ79076.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_068_000M1_scaffold_458_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7069..9696)
DNA (2628bp) protein (876aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5VED4_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CCZ79077.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
diguanylate cyclase (GGDEF) domain
L3_068_000M1_scaffold_458_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9701..11176)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79078.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
RNA methylase
L3_068_000M1_scaffold_458_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11244..11957)
DNA (714bp) protein (238aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTR4_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CCZ79079.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
N-acetylmuramoyl-L-alanine amidase
L3_068_000M1_scaffold_458_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12433..12588)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79080.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_068_000M1_scaffold_458_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12736..13761)
DNA (1026bp) protein (342aa)
Branched-chain-amino-acid transaminase (IlvE) n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6L2_9FIRM
Branched-chain-amino-acid transaminase (IlvE) {ECO:0000313|EMBL:CCZ79081.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
branched-chain amino acid aminotransferase
L3_068_000M1_scaffold_458_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13931..15442)
DNA (1512bp) protein (504aa)
MoxR-like ATPase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEE1_9FIRM
MoxR-like ATPase {ECO:0000313|EMBL:CCZ79082.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
MoxR-like ATPase
L3_068_000M1_scaffold_458_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15459..16883)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79083.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_068_000M1_scaffold_458_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16897..17769)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79084.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_068_000M1_scaffold_458_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17789..19135)
DNA (1347bp) protein (449aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM23_9FIRM
Folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:CCZ79085.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_068_000M1_scaffold_458_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19146..19991)
DNA (846bp) protein (282aa)
DAK2 domain/DegV family protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6L5_9FIRM
DAK2 domain/DegV family protein {ECO:0000313|EMBL:CCZ79086.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
DAK2 domain/DegV family protein
L3_068_000M1_scaffold_458_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20170..21450)
DNA (1281bp) protein (427aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEE6_9FIRM
L3_068_000M1_scaffold_458_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21644..22147
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79088.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_068_000M1_scaffold_458_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22248..22451
DNA (204bp) protein (68aa)
Putative cold-shock DNA-binding domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTS1_9FIRM
Putative cold-shock DNA-binding domain protein {ECO:0000313|EMBL:CCZ79089.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative cold-shock DNA-binding domain protein
L3_068_000M1_scaffold_458_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22604..23107)
DNA (504bp) protein (168aa)
Hydrolase NUDIX family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM26_9FIRM
Hydrolase NUDIX family {ECO:0000313|EMBL:CCZ79090.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ADP-ribose pyrophosphatase
L3_068_000M1_scaffold_458_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23230..23988)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79091.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_068_000M1_scaffold_458_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23985..25529)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79092.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_068_000M1_scaffold_458_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25646..27304)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79093.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
membrane protein
L3_068_000M1_scaffold_458_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27308..28024)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79094.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_068_000M1_scaffold_458_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28130..28396)
DNA (267bp) protein (89aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM30_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CCZ79095.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ribosomal-protein-alanine acetyltransferase
L3_068_000M1_scaffold_458_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28404..29858)
DNA (1455bp) protein (485aa)
Ferredoxin hydrogenase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6M2_9FIRM
Ferredoxin hydrogenase {ECO:0000313|EMBL:CCZ79096.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ferredoxin hydrogenase
L3_068_000M1_scaffold_458_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29976..31757
DNA (1782bp) protein (594aa)
Subtilisin-like serine proteases n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEF5_9FIRM
Subtilisin-like serine proteases {ECO:0000313|EMBL:CCZ79097.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
peptidase S8/S53 subtilisin kexin sedolisin
L3_068_000M1_scaffold_458_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31767..34445)
DNA (2679bp) protein (893aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULC7_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CCZ79098.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
Displaying items 1-30 of 73 in total

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