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L3_068_000M1_scaffold_625

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_625_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..688)
DNA (687bp) protein (229aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6I359_9BACE
hypothetical protein
HlyD secretion family protein {ECO:0000313|EMBL:EYE48398.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_068_000M1_scaffold_625_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(685..1353)
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I3HQG9_BACFG
putative glycosyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EIZ00795.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_000M1_scaffold_625_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1334..2452)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I3HQH0_BACFG
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:BAD46758.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000M1_scaffold_625_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2449..4215)
DNA (1767bp) protein (589aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=Q650R7_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ00793.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_000M1_scaffold_625_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4428..4556)
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HQH2_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ00792.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
hypothetical protein
L3_068_000M1_scaffold_625_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4590..4736)
DNA (147bp) protein (49aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D1JQ48_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIZ00791.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_000M1_scaffold_625_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4675..6420)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=Q650R8_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ00790.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_000M1_scaffold_625_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6432..8243)
DNA (1812bp) protein (604aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=Q650R9_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD46755.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000M1_scaffold_625_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8275..8739)
DNA (465bp) protein (155aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q650S0_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYB11802.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_068_000M1_scaffold_625_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8773..9612)
DNA (840bp) protein (280aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I3HQH7_BACFG
putative glycosyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EIZ00787.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_000M1_scaffold_625_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9626..10597)
DNA (972bp) protein (324aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=D1JQ43_9BACE
Lanthionine synthetase C-like family protein {ECO:0000313|EMBL:EYB11800.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
hypothetical protein
L3_068_000M1_scaffold_625_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10590..12059)
DNA (1470bp) protein (490aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LIW8_9BACE
Outer membrane efflux family protein {ECO:0000313|EMBL:EXY93182.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative outer membrane protein TolC
L3_068_000M1_scaffold_625_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12214..12795)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1FCD5_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ00784.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative SpoU rRNA methylase family protein
L3_068_000M1_scaffold_625_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13198..14190
DNA (993bp) protein (331aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
Quinolinate synthase A n=2 Tax=Bacteroides fragilis RepID=I3HQI1_BACFG
nadA; putative quinolinate synthetase A
L3_068_000M1_scaffold_625_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14781..15365)
DNA (585bp) protein (195aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
Non-canonical purine NTP pyrophosphatase n=8 Tax=Bacteroides RepID=NTPA_BACFR
putative xanthosine triphosphate pyrophosphatase
L3_068_000M1_scaffold_625_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15376..16275)
DNA (900bp) protein (300aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=E4W2K4_BACFG
putative transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EKA86932.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_068_000M1_scaffold_625_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16290..19121)
DNA (2832bp) protein (944aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
Leucine--tRNA ligase n=2 Tax=Bacteroides RepID=F7LIW2_9BACE
leuS; putative Leucyl-tRNA synthetase
L3_068_000M1_scaffold_625_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19437..20513)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D1JQ35_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY93256.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L3_068_000M1_scaffold_625_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21253..23868
DNA (2616bp) protein (872aa)
DNA mismatch repair protein MutS n=10 Tax=Bacteroides RepID=C6I376_9BACE
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00039014}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
mutS; putative DNA mismatch repair protein MutS
L3_068_000M1_scaffold_625_20
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23869..24510)
DNA (642bp) protein (214aa)
Chloramphenicol acetyltransferase n=3 Tax=Bacteroides RepID=Q64MG8_BACFR
chloramphenicol acetyltransferase
Chloramphenicol acetyltransferase {ECO:0000313|EMBL:CDD43063.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_068_000M1_scaffold_625_21
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24507..25340)
DNA (834bp) protein (278aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
Prolipoprotein diacylglyceryl transferase n=14 Tax=Bacteroides RepID=LGT_BACFN
putative prolipoprotein diacylglyceryl transferase
L3_068_000M1_scaffold_625_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25351..26280)
DNA (930bp) protein (310aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
2-dehydropantoate 2-reductase n=3 Tax=Bacteroides fragilis RepID=Q5L7C0_BACFN
putative 2-dehydropantoate 2-reductase
L3_068_000M1_scaffold_625_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26576..27679)
DNA (1104bp) protein (368aa)
Ribosome-binding ATPase YchF n=15 Tax=Bacteroides RepID=E1WT71_BACF6
putative ATP/GTP-binding protein
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
L3_068_000M1_scaffold_625_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27900..29285)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64MH2_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ17202.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
L3_068_000M1_scaffold_625_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29458..30270
DNA (813bp) protein (271aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=D1JQ27_9BACE
putative lipase/esterase
Alpha/beta hydrolase fold family protein {ECO:0000313|EMBL:EXY82219.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
L3_068_000M1_scaffold_625_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30418..31365
DNA (948bp) protein (316aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
Cysteine synthase A n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64MH4_BACFR
cysteine synthase A
L3_068_000M1_scaffold_625_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31463..31936)
DNA (474bp) protein (158aa)
5-nitroimidazole antibiotic resistance protein n=11 Tax=Bacteroides RepID=Q64MH5_BACFR
putative 5-nitroimadazole antibiotic resistance protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ00769.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_000M1_scaffold_625_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32105..32713)
DNA (609bp) protein (203aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I9VBN1_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ01979.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
putative transmembrane protein
L3_068_000M1_scaffold_625_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32719..33204)
DNA (486bp) protein (162aa)
RNA polymerase ECF-type sigma factor n=14 Tax=Bacteroides RepID=Q64MH7_BACFR
putative RNA polymerase ECF-type sigma factor
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EXZ51477.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_068_000M1_scaffold_625_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33614..33892)
DNA (279bp) protein (93aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=E1WT64_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY67915.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
Displaying items 1-30 of 70 in total

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